DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4842 and AT3G26770

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_566798.1 Gene:AT3G26770 / 822290 AraportID:AT3G26770 Length:306 Species:Arabidopsis thaliana


Alignment Length:233 Identity:56/233 - (24%)
Similarity:101/233 - (43%) Gaps:31/233 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKSQHPDTDVFYHKLDITQK 67
            |.||..:..||..|:|:....|.|:...: :.|.||:|.   .....::...::..:.:.|:|.:
plant    41 LEGKVALITGGASGLGKATASEFLRHGAR-VVIADLDAE---TGTKTAKELGSEAEFVRCDVTVE 101

  Fly    68 SDIDAAYKATAERFGHFDVVVNGSGLMNDRL-----------VELTIQINLLGVINSTLTALEYM 121
            :||..|.:.|.||:|..||:.|.:|::....           .|..::||:.||::....|.::|
plant   102 ADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIKHAAKFM 166

  Fly   122 DKAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTD 186
            ..|   :.|.|:..|||||:........|:.:|.......::.|:.  ....||....|.||...
plant   167 IPA---RSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASE--LCEHGVRINCISPGTVA 226

  Fly   187 TGLLEDIGNKTTFTYDTPMLAMFNRVKRQKAEDCARNL 224
            |.|        |.:|   :..:|.:|..:|..:..:.:
plant   227 TPL--------TLSY---LQKVFPKVSEEKLRETVKGM 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 54/230 (23%)
AT3G26770NP_566798.1 Rossmann-fold NAD(P)(+)-binding proteins 40..293 CDD:473865 56/233 (24%)

Return to query results.
Submit another query.