DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and AT3G26760

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_189311.2 Gene:AT3G26760 / 822289 AraportID:AT3G26760 Length:300 Species:Arabidopsis thaliana


Alignment Length:247 Identity:47/247 - (19%)
Similarity:91/247 - (36%) Gaps:53/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAI-FDLNANEQLLAKWKSQHPDTDVFYHKLDITQ 66
            |.||..|..||..|||:...:|.:.:..:.:.: .|..|...:..:..|.     ..:.:.|:|:
plant    36 LEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSA-----AHFLRCDVTE 95

  Fly    67 KSDIDAAYKATAERFGHFDVVVNGSGL---------------MNDRLVELTIQINLLGVINSTLT 116
            :..|..|.:....|.|..||::|.:|:               ..|:::.|.::..:||:.::...
plant    96 EEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIKHAARA 160

  Fly   117 ALEYMDKAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTIC 181
            .:      ..|.|.::. :||::||........||.:|..:....:.:|:            .:|
plant   161 MI------PAGSGSILC-LSSISGLMGGLGPHAYSISKFTIPGVVKTVAS------------ELC 206

  Fly   182 PGFTDTGLLEDIGNKTTFTY-------------DTPMLAMFNRVKRQKAEDC 220
            ........:...|..|..|.             :..:||:.|.....|.|.|
plant   207 KHGLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKC 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 45/244 (18%)
AT3G26760NP_189311.2 Rossmann-fold NAD(P)(+)-binding proteins 35..290 CDD:473865 47/247 (19%)

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