DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and SDR3

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_182235.1 Gene:SDR3 / 819326 AraportID:AT2G47130 Length:257 Species:Arabidopsis thaliana


Alignment Length:207 Identity:46/207 - (22%)
Similarity:85/207 - (41%) Gaps:52/207 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQL-------LAKWKSQHPDTDVFYH 60
            |.||..:..||..|||.:.|:.......|.:.:   :..|:|       :.|.|:.       ::
plant     6 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIV---DFQEELGQNVAVSVGKDKAS-------FY 60

  Fly    61 KLDITQKSDIDAAYKATAERFGHFDVVVNGSGLM---------NDRLVELTIQINLLGVINSTLT 116
            :.|:|.:.:::.|.|.|.|::|..||:.:.:|:|         |....:.|:.:|:.|.......
plant    61 RCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKH 125

  Fly   117 ALEYMDKAKGGKGGLIVN---ISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFL 178
            |...|.: ||.:|.::..   .|.:.|..|.|    |:|:|                 |:.:|.:
plant   126 AARAMVE-KGTRGSIVCTTSVASEIGGPGPHA----YTASK-----------------HALLGLV 168

  Fly   179 -TICPGFTDTGL 189
             :.|.|....|:
plant   169 KSACGGLGKYGI 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 44/204 (22%)
SDR3NP_182235.1 Rossmann-fold NAD(P)(+)-binding proteins 5..252 CDD:473865 46/207 (22%)

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