DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4842 and AT2G29310

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_180492.1 Gene:AT2G29310 / 817480 AraportID:AT2G29310 Length:262 Species:Arabidopsis thaliana


Alignment Length:219 Identity:56/219 - (25%)
Similarity:89/219 - (40%) Gaps:25/219 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNAN--EQLLAKWKSQHPDTDVFYHKLDIT 65
            |.|...:..|...|||...|:||.... ..:.|.|::..  .|.|::|:.:  ...|.....|:.
plant     7 LQGMTALVTGAASGIGYAIVEELASFG-AIIHICDISETLLSQSLSEWEKK--GFQVSGSICDVA 68

  Fly    66 QKSDIDAAYKATAERF-GHFDVVVNGSGLMNDRLV--------ELTIQINLLGVIN-STLTALEY 120
            .:.|.:...:..:..| |..:::||..|::..:..        ...|..||....: |.|:.|  
plant    69 SRPDREKLMQTVSSLFDGKLNILVNNVGVIRGKPTTEYVAEDFSYHISTNLEPAFHFSQLSHL-- 131

  Fly   121 MDKAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFT 185
            :.||.|  .|.||.:||..|:......:|||..|..:...||.:|..  :|..|:....:.|...
plant   132 LLKASG--FGSIVFMSSATGVVSVQCGSIYSLTKGALNQLTRNLACE--WAKDGIRANAVAPNVV 192

  Fly   186 DTGL----LEDIGNKTTFTYDTPM 205
            .|.|    |||:|.|......||:
plant   193 KTPLSQSYLEDVGFKEALFSRTPL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 54/216 (25%)
AT2G29310NP_180492.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 56/219 (26%)

Return to query results.
Submit another query.