DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and AT2G29300

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001189631.1 Gene:AT2G29300 / 817479 AraportID:AT2G29300 Length:286 Species:Arabidopsis thaliana


Alignment Length:216 Identity:46/216 - (21%)
Similarity:87/216 - (40%) Gaps:18/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNAN--EQLLAKWKSQHPDTDVFYHKLDIT 65
            |.|...:..|...|||...|:||.....: :.:.|::..  .|.|.:|:.:  ...|.....|:|
plant     7 LQGMTALVTGAASGIGYAIVEELAGFGAR-IHVCDISETLLNQSLREWEKK--GFQVSGSVCDVT 68

  Fly    66 QKSDIDAAYKATAERF-GHFDVVVNGSGLMNDRLVELTIQINLLGVINSTLTALEYMDK-----A 124
            .:.:.:...:..:..| |..:::||..|::..:.....:..:....|::.|.|..:..:     .
plant    69 SRPEREKLMQTVSSLFDGKLNILVNNVGVLRAKPTTEYVADDFTFHISTNLEAAYHFCQLSHPLL 133

  Fly   125 KGGKGGLIVNISSVAG-LQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTG 188
            |....|.||.:|||:| :..|...::|...|..:....|.:|..  :|..|:....:.|....|.
plant   134 KTSGYGSIVFLSSVSGVVSITDCGSLYGLTKGALNQLARNLACE--WAKDGIRANAVAPNVVKTA 196

  Fly   189 ----LLEDIGNKTTFTYDTPM 205
                .|:|:..|......||:
plant   197 QSQFFLQDVSKKEGLFSRTPL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 44/213 (21%)
AT2G29300NP_001189631.1 Rossmann-fold NAD(P)(+)-binding proteins 4..255 CDD:473865 46/216 (21%)

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