DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and Hpgd

DIOPT Version :9

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_077366.2 Gene:Hpgd / 79242 RGDID:620087 Length:266 Species:Rattus norvegicus


Alignment Length:247 Identity:80/247 - (32%)
Similarity:123/247 - (49%) Gaps:10/247 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLAGKNVVYLGGFGGIGQKCVQELLQRPIK-ALAIFDLNANEQLLAKWKSQHPDTDVFYHKLDI 64
            |.:.||..:..|...|||:...:.||....| ||..::|....:..|....|.......:.:.|:
  Rat     1 MHVNGKVALVTGAAQGIGKAFTEALLLHGAKVALVDWNLETGVKCKAALDEQFEPQKTLFIQCDV 65

  Fly    65 TQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTIQINLLGVINSTLTALEYMDKAKGGKG 129
            ..:..:...::...:.||..|::||.:|:.|::..|.|:||||:.||:.|...|:||.|..||:|
  Rat    66 ADQKQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEQTLQINLVSVISGTYLGLDYMSKQNGGEG 130

  Fly   130 GLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDI- 193
            |:|:||||:|||.|.|...:|.|:|.|:..|||:.|.......|||....|||||..|.:||.| 
  Rat   131 GIIINISSIAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVKTPILESIE 195

  Fly   194 -----GNKTTFTYDTPMLAMFNRVKRQKAEDCARNLVSAIE-TSKNGTVLML 239
                 |....:|.....:..|..:....|  .|..|::.|| .:.||.::.:
  Rat   196 KEENMGQYIEYTDQIKAMMKFYGILDPSA--IANGLINLIEDDALNGAIMKI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 NADB_Rossmann 6..247 CDD:304358 78/242 (32%)
adh_short 6..194 CDD:278532 68/194 (35%)
HpgdNP_077366.2 ADH_SDR_c_like 6..254 CDD:187584 78/242 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344850
Domainoid 1 1.000 142 1.000 Domainoid score I4569
eggNOG 1 0.900 - - E2759_KOG4169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4290
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053465at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44427
orthoMCL 1 0.900 - - OOG6_100916
Panther 1 1.100 - - O PTHR44229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.760

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