DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and hpgd

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001313470.1 Gene:hpgd / 565975 ZFINID:ZDB-GENE-080728-2 Length:261 Species:Danio rerio


Alignment Length:246 Identity:82/246 - (33%)
Similarity:129/246 - (52%) Gaps:8/246 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLN--ANEQLLAKWKSQHPDTDVFYHKLD 63
            |.|.||..:..||..|||:..|:||||...| :|:.|||  ..|:..:....|..:.:..:.:.|
Zfish     1 MSLHGKTALVTGGAQGIGRAVVEELLQNGAK-VALVDLNQSVGEECKSDLDDQFGEDNCIFIQCD 64

  Fly    64 ITQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTIQINLLGVINSTLTALEYMDKAKGGK 128
            :|....:..|::.|.:|||..|:|:|.:|:.|::..|.||::||..||..|..|||:|.|..|.:
Zfish    65 VTDGEKLGDAFRNTVDRFGRLDIVINNAGINNEKNWEKTIEVNLTSVIKGTYLALEHMSKEYGKQ 129

  Fly   129 GGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDI 193
            ||.|:|:||:|....:....:|:|.|.||..|:||||:.....:.||....:||.|.||.||:.:
Zfish   130 GGAIINVSSMAAFLHSPHQPVYTATKYGVIGFSRAMADASEQGNYGVRINALCPAFVDTQLLQTV 194

  Fly   194 GNKTTF----TYDTPMLAMFNRVKRQKAEDCARNLVSAI-ETSKNGTVLML 239
            .::.|.    .|........::....|....|..::..| :.|.||.|:.:
Zfish   195 EHEETMGKFVKYKDDFKQRMDKYGVLKPSLIAEGMLRLITDESLNGAVMKI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 79/241 (33%)
hpgdNP_001313470.1 ADH_SDR_c_like 6..254 CDD:187584 79/241 (33%)

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