DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and scu

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster


Alignment Length:271 Identity:72/271 - (26%)
Similarity:113/271 - (41%) Gaps:61/271 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KNVVYL--GGFGGIGQKCVQELLQRPIKALAIFDL---NANEQLLAKWKSQHPDTDVFYHKLDIT 65
            ||.|.|  ||..|:|:...:.|.::....: :.||   ..||  :||   :..|..||. .:|:|
  Fly     3 KNAVSLVTGGASGLGRATAERLAKQGASVI-LADLPSSKGNE--VAK---ELGDKVVFV-PVDVT 60

  Fly    66 QKSDIDAAYKATAERFGHFDVVVNGSGL------------MNDRLVEL--TIQINLLGVINSTLT 116
            .:.|:.||.:...::||..|:.||.:|.            :..||.:.  .|.||.:|..|....
  Fly    61 SEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRL 125

  Fly   117 ALEYM---DKAKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFL 178
            :...|   :..:.|:.|:|||.:|||........|.|||:|..|...|..:|..  .:..|:...
  Fly   126 SAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARD--LSTQGIRIC 188

  Fly   179 TICPGFTDTGLLEDIGNKTTFTYDTPMLAMF-NRVKRQKAEDCA-----------RNLVSAIETS 231
            ||.||.                ::|||||.. .:|:...|:...           .:||.||..:
  Fly   189 TIAPGL----------------FNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYEN 237

  Fly   232 K--NGTVLMLE 240
            .  ||.|:.::
  Fly   238 PLLNGEVIRID 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 72/271 (27%)
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 72/271 (27%)

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