DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4842 and SPOM_SPCC162.03

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_588241.1 Gene:SPOM_SPCC162.03 / 2539382 PomBaseID:SPCC162.03 Length:292 Species:Schizosaccharomyces pombe


Alignment Length:164 Identity:51/164 - (31%)
Similarity:78/164 - (47%) Gaps:30/164 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKSQHPDTDVFYH------KLDITQ 66
            |:..|...|:|...|:..|.:....:|.              |:.|||....|      |||:|.
pombe     8 VLITGSSKGLGYALVKVGLAQGYNVIAC--------------SRAPDTITIEHSKLLKLKLDVTD 58

  Fly    67 KSDIDAAYKATAERFGHFDVVVN--GSGLMND----RLVEL--TIQINLLGVINSTLTALEYMDK 123
            ...::.|:|....|||:.|:|:|  |.||:.:    .:.|:  .:.:|..||...|..||..|  
pombe    59 VKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLM-- 121

  Fly   124 AKGGKGGLIVNISSVAGLQPTAIMAIYSAAKTGV 157
            .:.||||.|:.||||||..|:..:::|:|:|..|
pombe   122 RESGKGGRILQISSVAGYYPSPCLSMYNASKFAV 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 51/164 (31%)
SPOM_SPCC162.03NP_588241.1 17beta-HSD-like_SDR_c 7..248 CDD:187632 51/164 (31%)

Return to query results.
Submit another query.