DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4842 and Hpgd

DIOPT Version :10

Sequence 1:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_032304.2 Gene:Hpgd / 15446 MGIID:108085 Length:269 Species:Mus musculus


Alignment Length:245 Identity:80/245 - (32%)
Similarity:123/245 - (50%) Gaps:6/245 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLAGKNVVYLGGFGGIGQKCVQELLQRPIK-ALAIFDLNANEQLLAKWKSQHPDTDVFYHKLDI 64
            |.:.||..:..|...|||:...:.||....| ||..::|.|..:..|....|.......:.:.|:
Mouse     1 MHVNGKVALVTGAAQGIGKAFAEALLLHGAKVALVDWNLEAGVKCKAALDEQFEPQKTLFVQCDV 65

  Fly    65 TQKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTIQINLLGVINSTLTALEYMDKAKGGKG 129
            ..:..:...::...:.||..|::||.:|:.|::..|.|:||||:.||:.|...|:||.|..||:|
Mouse    66 ADQKQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEQTLQINLVSVISGTYLGLDYMSKQNGGEG 130

  Fly   130 GLIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDIG 194
            |:|:|:||:|||.|.|...:|.|:|.|:..|||:.|.......|||....|||||.||.:||.|.
Mouse   131 GIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVDTPILESIE 195

  Fly   195 NKTT----FTYDTPMLAMFNRVKRQKAEDCARNLVSAIE-TSKNGTVLML 239
            .:..    ..|...:.||............|..|::.|| .:.||.::.:
Mouse   196 KEENMGQYIEYKDQIKAMMKFYGVLHPSTIANGLINLIEDDALNGAIMKI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 78/240 (33%)
HpgdNP_032304.2 ADH_SDR_c_like 6..254 CDD:187584 78/240 (33%)

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