DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ringer and Tppp3

DIOPT Version :9

Sequence 1:NP_001246792.1 Gene:ringer / 39813 FlyBaseID:FBgn0266417 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001009639.1 Gene:Tppp3 / 291966 RGDID:1305061 Length:176 Species:Rattus norvegicus


Alignment Length:179 Identity:77/179 - (43%)
Similarity:102/179 - (56%) Gaps:21/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ATELAQLALEDEPKVSFSDQFKAFSKFGDSKSDGKLITLSQSDKWMKQAKVID-KKITTTDTGIH 84
            :|::|.|          .:.|:.|:..||.|:.|:.:......|..|..||.| |.:|.||..|.
  Rat     4 STDIAGL----------EESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIV 58

  Fly    85 FKKFKAMK---ISLSDYNKFLDDLA------KTKKVELSEIKQKLASCGAPGVVSVSAGKAAAAV 140
            |.|.||..   |:..::.|.|::||      |||:.....|.|.:|. ..|..:.|:..|...||
  Rat    59 FSKVKAKSARVINYEEFKKALEELATKRFKGKTKEEAFDAICQLIAG-KEPANIGVTKAKTGGAV 122

  Fly   141 DRLTDTSKYTGSHKERFDASGKGKGIAGRRNVVDGSGYVSGYQHKDTYD 189
            ||||||||||||||||||.||||||||||::::|.|||||.|::..|||
  Rat   123 DRLTDTSKYTGSHKERFDESGKGKGIAGRQDILDDSGYVSAYKNAGTYD 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ringerNP_001246792.1 p25-alpha 39..184 CDD:368481 71/154 (46%)
Tppp3NP_001009639.1 p25-alpha 11..166 CDD:398912 71/155 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338214
Domainoid 1 1.000 118 1.000 Domainoid score I5706
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4622
OMA 1 1.010 - - QHG52260
OrthoDB 1 1.010 - - D1317210at2759
OrthoFinder 1 1.000 - - FOG0002323
OrthoInspector 1 1.000 - - otm46152
orthoMCL 1 0.900 - - OOG6_102553
Panther 1 1.100 - - LDO PTHR12932
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1531
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.910

Return to query results.
Submit another query.