DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdh and YDL114W

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_010169.1 Gene:YDL114W / 851444 SGDID:S000002272 Length:308 Species:Saccharomyces cerevisiae


Alignment Length:229 Identity:61/229 - (26%)
Similarity:119/229 - (51%) Gaps:50/229 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SFRGKN--AVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPT------QSVM 75
            |...||  |::|||:.|:|.:::|: |:....||.:.|:|           :.||      .::.
Yeast    33 SILSKNATALITGGSSGLGFELAKE-LSRRINKVIVADIQ-----------SFPTFAQVEYNNIF 85

  Fly    76 IIKMDVANKKGVEATYEEIAKTFGNIDIVVNVAGI--------FNDKDVQRTLLVNLGG---IIN 129
            ..:.|:.:...::...:.|.:..|||:|::|.||:        ..:|:|::.:.:||.|   ||:
Yeast    86 YYQCDITSLDEIKNLKKAIERDHGNINIIINNAGVAHIKKLEHMTNKEVEQLIDINLIGAYRIIS 150

  Fly   130 STLSALPYMGKDNGGKGGIVVNMSSVVG-LDPMFIIPVYGATKAGIINFTRCLANEKYYQ----- 188
            :....:    .||  :.|.::|::||:| |.|..:.. |||:|..:|.|.:|::  ::::     
Yeast   151 TFAEDM----IDN--REGFIINIASVLGELTPARLTS-YGASKGAMIGFHKCMS--RHFRSLSTE 206

  Fly   189 --RSGIKFVTVCPGATMTDMFTNF--TEKIIFPE 218
              ::|||.:.||||...|:||.:.  ..|::.|:
Yeast   207 CNKTGIKTLLVCPGKIKTNMFIDVPTPSKLLAPD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 60/225 (27%)
YDL114WNP_010169.1 17beta-HSDXI-like_SDR_c 40..282 CDD:187598 58/222 (26%)

Return to query results.
Submit another query.