DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and NOL

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_568145.1 Gene:NOL / 830372 AraportID:AT5G04900 Length:348 Species:Arabidopsis thaliana


Alignment Length:268 Identity:65/268 - (24%)
Similarity:102/268 - (38%) Gaps:50/268 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKKGVE 88
            |.::||...|||..::::.|.||...|......:.:|..|:.......:.|...|.||...|.|.
plant    81 NILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGEHVWGTKCDVTEGKDVR 145

  Fly    89 ATYEEIAKTFGNIDIVVNVAGI----------FNDKDVQRTLLVNLGGIINSTLSALPYMGKDNG 143
            .......|....|||.:|.||.          .:|:|:...:..|..|::.....|:..|...: 
plant   146 ELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLCCREAMNMMLTQS- 209

  Fly   144 GKGGIVVNMSSVVGLD----PMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTV---CPGA 201
             :||.:.|:.. .|.|    |.|  ..|||||..:::.|:.|..|  .|...:|.|.|   .||.
plant   210 -RGGHIFNIDG-AGSDGRPTPRF--AAYGATKRSVVHLTKSLQAE--LQMQDVKNVVVHNLSPGM 268

  Fly   202 TMTDMFTNFTEKIIFPETSDETYRILDRLNKQSAADVSRCILNVL-EKDKNGAVYVIEGKRVYPL 265
            ..||:                       |...:....::..:||| |..:..|.|::...|..|.
plant   269 VTTDL-----------------------LMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRAIPA 310

  Fly   266 --EIKPQW 271
              .:||.:
plant   311 SGSMKPTY 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 61/252 (24%)
NOLNP_568145.1 PLN02657 17..>140 CDD:178263 16/58 (28%)
SDR_c 82..302 CDD:212491 60/249 (24%)

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