DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdh and SDR2

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_190736.1 Gene:SDR2 / 824331 AraportID:AT3G51680 Length:303 Species:Arabidopsis thaliana


Alignment Length:287 Identity:74/287 - (25%)
Similarity:119/287 - (41%) Gaps:53/287 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TTTRISQTKMSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNL--EEFVKLRAAHPT 71
            |.|.:...::  .||.|::||||.||| :.:..|.|...|.|.|.|: ||:  ....|..::|.|
plant    23 TNTTLYPKRL--EGKVAIITGGAHGIG-KATVMLFARHGATVVIADV-DNVAGSSLAKSLSSHKT 83

  Fly    72 Q-SVMIIKMDVANKKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLL------------VN 123
            . .|..|..||:.:..||.........:|.:||:.|.||:..|:...:::|            ||
plant    84 SPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVN 148

  Fly   124 LGGIINSTLSALPYMGKDNGGKG-------GIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCL 181
            :.|:         .:|..:|.:.       |.:::.:||.|:........|.|:|..|:..|:..
plant   149 VRGV---------GLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNA 204

  Fly   182 ANE--KYYQRSGIKFVTVCPGATMTDMFTNFTEKIIFPETSD-------ETYRILDRLNKQS--A 235
            |.|  ||    ||:...:.|....|.|..|...|....:..|       |..|.|..|..::  |
plant   205 ACELGKY----GIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRA 265

  Fly   236 ADVSRCILNVLEKDK---NGAVYVIEG 259
            .|::...|.:...:.   ||...|::|
plant   266 NDIAEAALYLASDESKYVNGHNLVVDG 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 70/271 (26%)
SDR2NP_190736.1 Rossmann-fold NAD(P)(+)-binding proteins 31..295 CDD:473865 72/279 (26%)

Return to query results.
Submit another query.