DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdh and AT2G47120

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001325398.1 Gene:AT2G47120 / 819325 AraportID:AT2G47120 Length:259 Species:Arabidopsis thaliana


Alignment Length:201 Identity:57/201 - (28%)
Similarity:91/201 - (45%) Gaps:31/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKKG 86
            ||..::||||.|||...:: |.....|||.|:|:|:.|.:.|.:.......|  ..:.||.|:..
plant     9 GKIVIITGGASGIGADAAR-LFTDHGAKVVIVDVQEELGQNVAVLIGKDKAS--FYRCDVTNETE 70

  Fly    87 VEATYEEIAKTFGNIDIVVNVAGI------FNDKDVQ---RTLLVNLGG---IINSTLSALPYMG 139
            ||...:...:..|.:|::.:.||:      |.|.|::   |.:.||:.|   .|.....|:    
plant    71 VEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIKHAARAM---- 131

  Fly   140 KDNGGKGGIV--VNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANE--KYYQRSGIKFVTVCPG 200
            .:.|.:|.||  .::|:.:|...    ..|.|:|.|::...|....:  ||    ||:...|.|.
plant   132 VEKGTRGSIVCTTSVSAEIGGGH----HGYTASKHGLVGLIRSACGDLGKY----GIRVNGVAPY 188

  Fly   201 ATMTDM 206
            |..|.|
plant   189 AVATPM 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 56/200 (28%)
AT2G47120NP_001325398.1 Rossmann-fold NAD(P)(+)-binding proteins 6..252 CDD:473865 57/201 (28%)

Return to query results.
Submit another query.