DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and AT2G29310

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_180492.1 Gene:AT2G29310 / 817480 AraportID:AT2G29310 Length:262 Species:Arabidopsis thaliana


Alignment Length:214 Identity:59/214 - (27%)
Similarity:98/214 - (45%) Gaps:21/214 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIID-----LQDNLEEFVKLRAAHPTQSVMI 76
            :.|.:|..|:|||.|.|||..:.::|.:.||. :.|.|     |..:|.|:.| :....:.|:  
plant     4 RWSLQGMTALVTGAASGIGYAIVEELASFGAI-IHICDISETLLSQSLSEWEK-KGFQVSGSI-- 64

  Fly    77 IKMDVANKKGVEATYEEIAKTF-GNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTL------SA 134
              .|||::...|...:.::..| |.::|:||..|:...|.....:..:....|::.|      |.
plant    65 --CDVASRPDREKLMQTVSSLFDGKLNILVNNVGVIRGKPTTEYVAEDFSYHISTNLEPAFHFSQ 127

  Fly   135 LPYMGKDNGGKGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCP 199
            |.::.....|.|.||. |||..|:..:....:|..||..:...||.||.|  :.:.||:...|.|
plant   128 LSHLLLKASGFGSIVF-MSSATGVVSVQCGSIYSLTKGALNQLTRNLACE--WAKDGIRANAVAP 189

  Fly   200 GATMTDMFTNFTEKIIFPE 218
            ....|.:..::.|.:.|.|
plant   190 NVVKTPLSQSYLEDVGFKE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 57/208 (27%)
AT2G29310NP_180492.1 Rossmann-fold NAD(P)(+)-binding proteins 4..254 CDD:473865 59/214 (28%)

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