DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and AT2G29150

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_180479.1 Gene:AT2G29150 / 817464 AraportID:AT2G29150 Length:268 Species:Arabidopsis thaliana


Alignment Length:224 Identity:67/224 - (29%)
Similarity:104/224 - (46%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QTKMSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAI----IDLQDNLEEFVKLRAAHPTQSVM 75
            :::.|..|..|:||||:.|:|..|.::|...||.....    ..||:.|.|: :.:....|.|| 
plant    11 KSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREW-QAKGFEVTTSV- 73

  Fly    76 IIKMDVANKKGVEATYEEIAKTF-GNIDIVVNVAGI--------FNDKDVQRTLLVNLGGIINST 131
               .||::::..|...|.::..| |.::|:||.||.        :..:|....:..||....:.:
plant    74 ---CDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFHLS 135

  Fly   132 LSALPYMGKDNGGKGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVT 196
            ..|.|.: |.:|  .|.:|.||||.||.... ..:|||:|..:....|.||.|  :....|:..:
plant   136 QIAHPLL-KASG--SGSIVFMSSVAGLVHTG-ASIYGASKGAMNQLGRSLACE--WASDNIRVNS 194

  Fly   197 VCPGATMTDMFTNFTEKIIFPETSDETYR 225
            |||....|.: |:|    ||   |||..|
plant   195 VCPWVITTPL-TSF----IF---SDEKLR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 65/216 (30%)
AT2G29150NP_180479.1 Rossmann-fold NAD(P)(+)-binding proteins 13..262 CDD:473865 67/222 (30%)

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