DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and CG4842

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_648885.1 Gene:CG4842 / 39817 FlyBaseID:FBgn0036620 Length:259 Species:Drosophila melanogaster


Alignment Length:259 Identity:101/259 - (38%)
Similarity:151/259 - (58%) Gaps:11/259 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVA 82
            |...|||.|..||.||||.:..::||......:||.||..|.:...|.::.||...|...|:|:.
  Fly     1 MDLAGKNVVYLGGFGGIGQKCVQELLQRPIKALAIFDLNANEQLLAKWKSQHPDTDVFYHKLDIT 65

  Fly    83 NKKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNGGKGG 147
            .|..::|.|:..|:.||:.|:|||.:|:.||:.|:.|:.:||.|:|||||:||.||.|..|||||
  Fly    66 QKSDIDAAYKATAERFGHFDVVVNGSGLMNDRLVELTIQINLLGVINSTLTALEYMDKAKGGKGG 130

  Fly   148 IVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFTNFTE 212
            ::||:|||.||.|..|:.:|.|.|.|:..|||.:||..:|..||:.|:|:|||.|.|.:..:...
  Fly   131 LIVNISSVAGLQPTAIMAIYSAAKTGVTTFTRAMANPYFYAHSGVGFLTICPGFTDTGLLEDIGN 195

  Fly   213 KIIFPETSDETY-----RILDRLNKQSAADVSRCILNVLEKDKNGAVYVIEGKRVYPLEIKPQW 271
            |..|      ||     .:.:|:.:|.|.|.:|.:::.:|..|||.|.::|......:::...|
  Fly   196 KTTF------TYDTPMLAMFNRVKRQKAEDCARNLVSAIETSKNGTVLMLEMGETTEVDMPVMW 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 97/240 (40%)
CG4842NP_648885.1 Rossmann-fold NAD(P)(+)-binding proteins 6..247 CDD:473865 98/246 (40%)

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