DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and zgc:56585

DIOPT Version :9

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_956621.2 Gene:zgc:56585 / 393297 ZFINID:ZDB-GENE-040426-1084 Length:270 Species:Danio rerio


Alignment Length:247 Identity:83/247 - (33%)
Similarity:137/247 - (55%) Gaps:9/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVK--LRAAHPTQSVMIIKMD 80
            |..:.|.|||||.|.|:|....:.|:..| :|||:||:..:|.|.:|  |...:..........|
Zfish     1 MDLKDKVAVVTGAAQGLGRSFVEILMKNG-SKVALIDVNKSLGEELKTTLNKEYGPNRAEFYTAD 64

  Fly    81 VANKKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNGGK 145
            |::::..:...::|.:.||.|||:.|.|||.|:|..::|:.:||||::..|..||.||.|:|||.
Zfish    65 VSSEEDFKGVLKKIVEQFGQIDIMCNNAGIINEKHWEKTIAINLGGVVRGTYLALEYMKKENGGS 129

  Fly   146 GGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFT-- 208
            ||::||::|:.||.|:.:.|:|.|||.|::.|:|.:|....:...|::...:||....|.:.:  
Zfish   130 GGVIVNVASMAGLGPLPVAPIYTATKHGVVGFSRAMAVVSKFSNYGVRINVLCPWFVKTSLLSLL 194

  Fly   209 NFTEKI-IFPETSDETYRILDRLNKQSAADVSRCILNVLEKD--KNGAVYVI 257
            |..|.. .|.:..:.|..:::.........|::..| ||.||  |:|...:|
Zfish   195 NSEEHTGSFSQMKEITEMLMESEGCLEVDVVAKAFL-VLVKDESKDGEALMI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 NADB_Rossmann 23..259 CDD:304358 82/242 (34%)
adh_short 23..214 CDD:278532 71/194 (37%)
zgc:56585NP_956621.2 ADH_SDR_c_like 6..254 CDD:187584 82/242 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585837
Domainoid 1 1.000 134 1.000 Domainoid score I4954
eggNOG 1 0.900 - - E2759_KOG4169
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H134459
Inparanoid 1 1.050 136 1.000 Inparanoid score I4534
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053465at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6395
orthoMCL 1 0.900 - - OOG6_100916
Panther 1 1.100 - - O PTHR44229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7321
SonicParanoid 1 1.000 - - X2961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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