DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and Fbp2

DIOPT Version :9

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_001285777.1 Gene:Fbp2 / 34259 FlyBaseID:FBgn0000640 Length:256 Species:Drosophila melanogaster


Alignment Length:246 Identity:82/246 - (33%)
Similarity:145/246 - (58%) Gaps:4/246 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKKG 86
            |||.|..|...|||.|:..||:......:.|:...:|::...||:|.:|:..|:.::|::..|..
  Fly     6 GKNVVYVGSFSGIGWQMMMQLMQKDIKMMGIMHRMENVKMMKKLQAINPSVKVVFMQMNLMEKMS 70

  Fly    87 VEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNGGKGGIVVN 151
            :|...:::.:..|:||:::|..|:..||||:.|:.:||.|:|.||:.|:|||.|...|.||:|||
  Fly    71 IEQAMKKMGQMMGHIDVMINGEGVLLDKDVETTMGMNLTGMIQSTMMAMPYMDKTQMGMGGMVVN 135

  Fly   152 MSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFTNFTEKIIF 216
            ||||.||:|.....||.|...||:.|||.:.::..||::|:.|:.:|||.|.::|..|..:.:.:
  Fly   136 MSSVYGLEPAPAFSVYAAAMHGILGFTRSMGDKMIYQKTGVMFMAMCPGLTNSEMIMNLRDNVTW 200

  Fly   217 PETSDETYRILDRLNKQSAADVSRCILNVLEKDKNGAVYVI---EGKRVYP 264
             ..|:.....::...:|...:.:..:::.:|..|||:::::   :.|.|.|
  Fly   201 -HHSESMVEAIESAKRQMPEEAAMQMIHAMEMMKNGSMWIVSMGQLKEVTP 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 NADB_Rossmann 23..259 CDD:304358 78/238 (33%)
adh_short 23..214 CDD:278532 72/190 (38%)
Fbp2NP_001285777.1 ADH_SDR_c_like 7..249 CDD:187584 79/242 (33%)
adh_short 7..198 CDD:278532 72/190 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455198
Domainoid 1 1.000 96 1.000 Domainoid score I2453
eggNOG 1 0.900 - - E2759_KOG4169
Homologene 1 1.000 - - H134459
Inparanoid 1 1.050 136 1.000 Inparanoid score I4534
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053465at2759
OrthoFinder 1 1.000 - - FOG0008550
OrthoInspector 1 1.000 - - mtm6395
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR44229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2961
1110.900

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