DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdh and HPGD

DIOPT Version :10

Sequence 1:NP_524105.2 Gene:Pdh / 39812 FlyBaseID:FBgn0011693 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_000851.2 Gene:HPGD / 3248 HGNCID:5154 Length:266 Species:Homo sapiens


Alignment Length:269 Identity:93/269 - (34%)
Similarity:147/269 - (54%) Gaps:19/269 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MSFRGKNAVVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAA----HPTQSVMIIK 78
            |...||.|:|||.|.|||...::.||..| ||||::|.  |||..|:.:||    ...|..:.|:
Human     1 MHVNGKVALVTGAAQGIGRAFAEALLLKG-AKVALVDW--NLEAGVQCKAALDEQFEPQKTLFIQ 62

  Fly    79 MDVANKKGVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLSALPYMGKDNG 143
            .|||:::.:..|:.::...||.:||:||.||:.|:|:.::||.:||..:|:.|...|.||.|.||
Human    63 CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNG 127

  Fly   144 GKGGIVVNMSSVVGLDPMFIIPVYGATKAGIINFTRCLANEKYYQRSGIKFVTVCPGATMTDMFT 208
            |:|||::||||:.||.|:...|||.|:|.||:.|||..|.......||::...:|||...|.:..
Human   128 GEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 192

  Fly   209 NFTEKIIFPETSDETYRILDRLNKQSAAD---VSRCILNVLEKDK-NGAVY-VIEGKRVY----- 263
            :..::....:..:....|.|.:......|   ::..::.::|.|. |||:. :...|.::     
Human   193 SIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDYD 257

  Fly   264 --PLEIKPQ 270
              |.:.|.|
Human   258 TTPFQAKTQ 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdhNP_524105.2 Rossmann-fold NAD(P)(+)-binding proteins 23..259 CDD:473865 87/244 (36%)
HPGDNP_000851.2 ADH_SDR_c_like 6..254 CDD:187584 88/250 (35%)

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