DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin104 and YGR130C

DIOPT Version :9

Sequence 1:NP_648879.1 Gene:Golgin104 / 39810 FlyBaseID:FBgn0036614 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_011646.1 Gene:YGR130C / 853031 SGDID:S000003362 Length:816 Species:Saccharomyces cerevisiae


Alignment Length:738 Identity:154/738 - (20%)
Similarity:281/738 - (38%) Gaps:173/738 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ESAQAT-PPAEMENPASVENGDSGRDSNHIEGKAIGDVDMKADSIEQQLEESDVKTESNGDQLTD 65
            |:.:|| ..|......:..:..|...:|.:|..|     .:|.|:|::.|:...::.|.|....|
Yeast   197 EATEATADTATTTTTTTSTSTTSTSTTNAVENSA-----DEATSVEEEHEDKVSESTSIGKGTAD 256

  Fly    66 QDEGKIEQDLKA--AVLEQVPIEEEGLS---LRFKDLQAQEK--VKELQQTPSQPPQNDILSHVH 123
            ..:..:.:.:.:  .|||....::.|.|   :...|.|.:||  ||::     .||..:....|.
Yeast   257 SAQINVAEPISSENGVLEPRTTDQSGGSKSGVVPTDEQKEEKSDVKKV-----NPPSGEEKKEVE 316

  Fly   124 CLAQLEE--QRRNYEQQLEQLRTSNVQKDNMITLIQRENAILGKEKQACRKEMEMANKEKEATVI 186
            .....||  ::.:.|:..|:..|....:...    :.:.:.:...|.......|.:.||:...  
Yeast   317 AEGDAEEETEQSSAEESAERTSTPETSEPES----EEDESPIDPSKAPKVPFQEPSRKERTGI-- 375

  Fly   187 KFAM-KEKLLIDAKKEKEAVEKQLAEAKKE----VKNVSTRFLAVS-------EEKSRMTYIIDE 239
             ||: |.......:|.|.|.........:.    ||.....:|:.:       :||....::.|.
Yeast   376 -FALWKSPTSSSTQKSKTAAPSNPVATPENPELIVKTKEHGYLSKAVYDKINYDEKIHQAWLADL 439

  Fly   240 KCNEVRKYQRECEKYKTEMGHLESKLKYHINKLNIETEAKAVVERKLEEEKNAPNKLEEKA---- 300
            :..|..||..:.::||.::..|::::.      .||...||:.|...|:.:.:.|:|.:|.    
Yeast   440 RAKEKDKYDAKNKEYKEKLQDLQNQID------EIENSMKAMREETSEKIEVSKNRLVKKIIDVN 498

  Fly   301 ---NEKLKMEFEANTILLKHEITSKTEALDKLTKEQQKLSAANKE---LQNQLQEITTEHNQLTE 359
               |.|..|..:....:...::..|.|.|||.|..:.::...|.|   :|.:..:.||..:.|::
Yeast   499 AEHNNKKLMILKDTENMKNQKLQEKNEVLDKQTNVKSEIDDLNNEKTNVQKEFNDWTTNLSNLSQ 563

  Fly   360 EYN----RLRELHNSVEGSYSDELLNSAKLRGQLEELQLLRTQNTINEEKLMDQQKRVQKLEALV 420
            :.:    ::.:: |..:|...:|:.|..|.:..|.         |..||.....:|.||.||:: 
Yeast   564 QLDAQIFKINQI-NLKQGKVQNEIDNLEKKKEDLV---------TQTEENKKLHEKNVQVLESV- 617

  Fly   421 QDNETDLEQLKVKRQELLTINKEMSELIVQLQNDICLAKAKAQGLDAENKLLKQEKLTYDTKYNQ 485
             :|:..|.|:.....::.::..|::  |::.:|    |..|.| |.|..|.|:.|:..:      
Yeast   618 -ENKEYLPQINDIDNQISSLLNEVT--IIKQEN----ANEKTQ-LSAITKRLEDERRAH------ 668

  Fly   486 LEQQLSLEASE--KNEERLLLAKHLSEKTKMYELTKQKLEDVQGDFEATQHKHATVLKELHRELN 548
             |:||.|||.|  :.||.||            |..:|:||:                 :.|:...
Yeast   669 -EEQLKLEAEERKRKEENLL------------EKQRQELEE-----------------QAHQAQL 703

  Fly   549 KYKRGITEPKTPISYCSNCQQAINGYPTENPQQRSHSRSSSHGSMHSGSRRASESSESETVASSA 613
            .:::.||:.|          |..|...||                 ...:.|:|..|.|.|....
Yeast   704 DHEQQITQVK----------QTYNDQLTE-----------------LQDKLATEEKELEAVKRER 741

  Fly   614 TTVQ-QPPPQQDLQAVPSKKVLVERILRLQQATARQTERIEFLENHTAALVAEVQKKSKVVQHYM 677
            |.:| :...::..:...:.:.|.:.||..|.   :|.|.|...|||                   
Yeast   742 TRLQAEKAIEEQTRQKNADEALKQEILSRQH---KQAEGIHAAENH------------------- 784

  Fly   678 LRDQTAGALTTSRSDQNKSELVK 700
                   .:...||.:|.|.|.|
Yeast   785 -------KIPNDRSQKNTSVLPK 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin104NP_648879.1 LMBR1 <328..>430 CDD:282625 24/108 (22%)
YGR130CNP_011646.1 Smc <440..767 CDD:224117 89/414 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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