DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Golgin104 and ccdc186

DIOPT Version :9

Sequence 1:NP_648879.1 Gene:Golgin104 / 39810 FlyBaseID:FBgn0036614 Length:776 Species:Drosophila melanogaster
Sequence 2:XP_009305037.1 Gene:ccdc186 / 557112 ZFINID:ZDB-GENE-100318-3 Length:955 Species:Danio rerio


Alignment Length:849 Identity:245/849 - (28%)
Similarity:417/849 - (49%) Gaps:144/849 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESAQATPPAEMENPASV-ENGDSGRDSN----HIEGKAIGDVD--MKADSIEQQLEESDVKTES 58
            |....::...|:.:..|| :|..:..:.|    ....|.:.:::  :..:|:..:||:..:.::|
Zfish   162 MTPTSSSHAEELPDVVSVLQNSQTNANLNPYDTECSRKLLSEIERSLSQESLLDELEDELLNSQS 226

  Fly    59 NGDQLTDQDEGKIEQDLKAAVLEQVPIEEEGLSLRFKDLQAQEKVKELQQTPSQPPQNDIL---- 119
            .|.:......| :::|..:.||.:..::       :|..|.::.:|.|.: .::..|..||    
Zfish   227 EGVRKGSHPNG-LQKDQNSMVLFEKCVQ-------YKYSQQEKAIKGLLE-ENKKHQELILGICS 282

  Fly   120 -----------------SHVHCLAQLEEQRRNYEQQLEQLRTSNVQKD----NMITLIQRENAIL 163
                             .|::.:.:.|.:.....::|:..|...|.:|    |.|..:|||.|. 
Zfish   283 EKDNMRDELKKRMETEKQHLYTIKKFESRVEELTKELKDSRDKLVHQDQAAKNAIQQMQREMAY- 346

  Fly   164 GKEKQACRKEMEMANKEKEATVIKFAMKEKLLIDAKKEKEAVEKQLAEAKKEVKNVSTRFLAVSE 228
             :.:|| .|:.|.|.:|||..|:|:...||..:|.::|||.:||:|.||..||...:.|...:::
Zfish   347 -RLEQA-NKKCEEARQEKETMVMKYVRGEKEALDLRREKEQLEKKLREATAEVDKQARRGNTLAQ 409

  Fly   229 EKSRMTYIIDEKCNEVRKYQRECEKYKTEMGHLESKLKYHINKLNIETEAKAVVERKLEE----- 288
            ||.|:..:.|.|.|||.:..||.||.|.|:.....|:|:..|||..||::....:.:|:|     
Zfish   410 EKGRLQQLYDAKENEVTRLMRELEKVKEEINSHVIKVKWAQNKLKSETDSHKETKDRLKETTAKL 474

  Fly   289 ----------EKNAPNKL-------EEKANE------KLKMEFEANTILLKHEITSKTEALDKLT 330
                      .||..:.:       |.|:||      :.|.|.|..    |.|.|.:.|......
Zfish   475 TQAKEETEQIRKNCQDMIRTYQESEEIKSNELDAKLRETKGELEKQ----KQEQTDQLEMHKAKI 535

  Fly   331 KEQQKLSAANKELQNQLQEITTEHNQLTEEYNRLRELHNSVEGSYSDELL--------NSAKLRG 387
            ||.:.|....||..::|..:.|:...|.:|..|           :.|||.        ..|:::.
Zfish   536 KELEDLKRTFKEGMDELTTLRTKVKCLEDERPR-----------WEDELCKYREIINRQKAEIQN 589

  Fly   388 QLEELQL---LRTQNTINEEKLMDQQKRVQKLEALVQDNETDLEQLKVKRQELLTINKEMSELIV 449
            |.|:|..   |..|:..:|:::...|:.|:.|.:.:.|.:.|:|..:.:..|||...:::|....
Zfish   590 QREKLTAITRLEEQHQRDEQEIASLQEEVENLNSQITDLQRDIEGSRTREAELLGFTEKLSSKNA 654

  Fly   450 QLQNDICLAKAKAQGLDA-----ENKLLKQEKLTYDTKYNQLEQQLSLEASEKNEERLLLAKHLS 509
            |||::....:|:...|::     .|||...|:...|     :..:|..|..::.||.|.|.   :
Zfish   655 QLQSESNSLQAQLDRLNSSSRELHNKLEDTERCLSD-----MMDRLKTEEQQRQEEVLALQ---T 711

  Fly   510 EKTKMYELTKQ---KLEDVQGDFEATQHKHATVLKELHRELNKYKRGITEPKTPISYCSNCQQAI 571
            |:|.:...|.|   ::|:::.:....:.|.|..:|:|.::|.:.::.:             :|..
Zfish   712 ERTSLQTETSQLKTRVEELRDELVTQKRKQAVNIKDLTKQLLQARKKL-------------EQVE 763

  Fly   572 NGYPTENPQQRSHSRSSSHGSMHS-GSRRASESSESETVASSATTVQQPPPQQDLQAVPSKKVLV 635
            || ..:.......|||||.||::: ||.....|.|::  :.|:..|....|:.|      |.|||
Zfish   764 NG-GCDREGSSMGSRSSSSGSLNARGSSMDDRSPENQ--SGSSVVVVDSFPEVD------KAVLV 819

  Fly   636 ERILRLQQATARQTERIEFLENHTAALVAEVQKKSKVVQHYMLRDQTAGALTTSRSDQNKSELVK 700
            |||:|||:|.||:.|:|||:|:|...||.|::||:|::|.|:||:: :|||::..||.||:.|.:
Zfish   820 ERIVRLQKAHARKNEKIEFMEDHIKQLVEEIRKKTKIIQSYVLREE-SGALSSEASDFNKAHLSR 883

  Fly   701 YGNGIMAAIYGGGSSKTGGENKAMSLELSLEINKKLQAVLEDTLLKNITLKENLDVLGLEVDNLT 765
            .| ||||::|....:.:|     ::|:||||||:||||||||||||||||||||..||.|::.|.
Zfish   884 RG-GIMASLYTSHPADSG-----LTLDLSLEINRKLQAVLEDTLLKNITLKENLQTLGSEIERLI 942

  Fly   766 RKLR 769
            ::.|
Zfish   943 KQQR 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin104NP_648879.1 LMBR1 <328..>430 CDD:282625 26/112 (23%)
ccdc186XP_009305037.1 SbcC 289..>764 CDD:223496 129/513 (25%)
DUF342 <414..505 CDD:302792 24/90 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587061
Domainoid 1 1.000 271 1.000 Domainoid score I1777
eggNOG 1 0.900 - - E1_KOG0992
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9963
Inparanoid 1 1.050 271 1.000 Inparanoid score I2972
OMA 1 1.010 - - QHG45578
OrthoDB 1 1.010 - - D273051at33208
OrthoFinder 1 1.000 - - FOG0006058
OrthoInspector 1 1.000 - - otm26497
orthoMCL 1 0.900 - - OOG6_107391
Panther 1 1.100 - - LDO PTHR18911
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4073
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.930

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