DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin104 and Ccdc186

DIOPT Version :10

Sequence 1:NP_648879.1 Gene:Golgin104 / 39810 FlyBaseID:FBgn0036614 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_739563.1 Gene:Ccdc186 / 213993 MGIID:2445022 Length:917 Species:Mus musculus


Alignment Length:859 Identity:246/859 - (28%)
Similarity:411/859 - (47%) Gaps:171/859 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QATPPAEMENPASVENGDSGRDSNHIEGKAIGDVDMKADSIEQQLEESDVKTESNGDQLTDQDEG 69
            :::.|||..||.:.             ..::.|.|.....|      |::||.|..|.|.    |
Mouse   141 KSSAPAEAANPKTA-------------SASLYDTDCTRKLI------SEMKTVSASDDLL----G 182

  Fly    70 KIEQDLKAAVL---EQVP----IEEEGLSL-----RFKDLQAQEKVKELQQTPSQPPQNDILS-- 120
            :||.:|.:|..   .|||    ..|:.|:|     ..:.||.:..||:|.: .::..|..||:  
Mouse   183 EIESELLSAEFAEGHQVPNGLNKGEQALALFEKCVHSRYLQQELTVKQLIK-ENKNHQELILNIC 246

  Fly   121 -------------------HVHCLAQL----EEQRRNYEQQLEQLRTSNVQKDNMITLIQRENAI 162
                               |::.:.||    ||..:..:...:||...:|...|.|..|.:|   
Mouse   247 SEKDSLREELRKRTETEKQHMNTIKQLELRIEELNKEIKASKDQLVAQDVTAKNAIQQIHKE--- 308

  Fly   163 LGKEKQACRKEMEMANKEKEATVIKFAMKEKLLIDAKKEKEAVEKQLAEAKKEVKNVSTRFLAVS 227
            :.:......|:.|.|.:||||.|:|:...||..:|.:||||.:|::|.:|.||::..:.:...:|
Mouse   309 MAQRMDQANKKCEEARQEKEAMVMKYVRGEKEALDLRKEKETLERKLRDASKELEKNTNKIKQLS 373

  Fly   228 EEKSRMTYIIDEKCNEVRKYQRECEKYKTEMGHLESKLKYHINKLNIETEAKAVVERKLEEEKNA 292
            :||.|:..:.:.|..|..:..||.||.|.||.....|:|:..|||..|.::....:.||:|....
Mouse   374 QEKGRLQQLYESKEGETTRLIREIEKLKEEMNSQVIKVKWAQNKLKAEMDSHKETKDKLKETTTK 438

  Fly   293 PNKLEEKA----------------NEKLKM-EFEANTILLKHEITSK-TEALDKL------TKEQ 333
            ..:.:|:|                :|::|. |.:|...:.|.|:..: .|..|:|      .||.
Mouse   439 LTQAKEEAEQIRQNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKEL 503

  Fly   334 QKLSAANKELQNQLQEITT-------EHNQLTEEYNRLRELHNSVEGSYSDELLNSAKLRGQLEE 391
            :.|....||..::|:.:.|       |..:..:|.::.||:.|. :.|....||:..|:..||.|
Mouse   504 EDLKRTFKEGMDELRTLRTKAKCLEDERLRTEDELSKYREIINR-QKSEIQNLLDKVKITDQLHE 567

  Fly   392 LQLLRTQNTINEEKLMDQQKRVQKLEALVQDNETDLEQLKVKRQELLTINKEMSELIVQLQNDIC 456
                  |....::::...::.::.|.:|:.|.:.|:|..:.:..|||...::::....|||::..
Mouse   568 ------QLQSGKQEIEHLKEEMESLNSLINDLQKDIEGSRKRESELLLFTEKLTSKNAQLQSESS 626

  Fly   457 LAKAKAQGL-------------------DAENKLLKQEKLTYDTKYNQLEQQLSLEASEKNEERL 502
            ..:::...|                   :.|:||||:|:|                  .|.|.:.
Mouse   627 ALQSQVDNLSCTESQLQSQCQQMGQANRNLESKLLKEEEL------------------RKEEVQT 673

  Fly   503 LLAKHLSEKTKMYELTKQKLEDVQGDFEATQHKHATVLKELHRELNKYKRGITEPKTPISYCSNC 567
            |.|:..:.:|::..|:.| :|:::.:....:.|||:.:|:|.::|.:.:|.:             
Mouse   674 LQAELSAAQTEVKALSTQ-VEELKDELVTQRRKHASNVKDLSKQLQQARRKL------------- 724

  Fly   568 QQAINGYPTENPQQRSHSRSSSHGSMHSGSRRASESSESETVASSATTVQQPPPQQDLQAVPSKK 632
            :|..||...::..... |||||.||:::   |.|....|....||:..|...|.       ..|.
Mouse   725 EQTENGNHDKDISSMG-SRSSSSGSLNA---RISAEDRSPENTSSSVAVDNFPE-------VDKA 778

  Fly   633 VLVERILRLQQATARQTERIEFLENHTAALVAEVQKKSKVVQHYMLRDQTAGALTTSRSDQNKSE 697
            :|:|||:|||:|.||:.|:|||:|:|...||.|::||:|::|.|:||:: :|.|::..||.||..
Mouse   779 MLIERIVRLQKAHARKNEKIEFMEDHIKQLVEEIRKKTKIIQSYVLREE-SGTLSSEASDFNKVH 842

  Fly   698 LVKYGNGIMAAIYGGGSSKTGGENKAMSLELSLEINKKLQAVLEDTLLKNITLKENLDVLGLEVD 762
            |.:.| ||||::|....:.:|     ::||||||||:||||||||||||||||||||..||.|::
Mouse   843 LSRRG-GIMASLYTSHPADSG-----LTLELSLEINRKLQAVLEDTLLKNITLKENLQTLGTEIE 901

  Fly   763 NLTRKLRSLEGSCK 776
            .|.:....||...|
Mouse   902 RLIKHQHELEQRTK 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin104NP_648879.1 SMC_prok_B 86..>373 CDD:274008 89/347 (26%)
Smc <314..>556 CDD:440809 59/274 (22%)
Ccdc186NP_739563.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..118
SMC_prok_B <264..593 CDD:274008 88/338 (26%)
EnvC 527..>726 CDD:443969 47/237 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 701..769 22/84 (26%)
Blue background indicates that the domain is not in the aligned region.

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