DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS34 and mrps34

DIOPT Version :9

Sequence 1:NP_524104.2 Gene:mRpS34 / 39809 FlyBaseID:FBgn0285951 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001007377.2 Gene:mrps34 / 795846 ZFINID:ZDB-GENE-041114-71 Length:220 Species:Danio rerio


Alignment Length:161 Identity:48/161 - (29%)
Similarity:74/161 - (45%) Gaps:38/161 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RGNTLWELVSNLPNWGVGRLLIR-NMFQRYPEPCYMRILKVQSVDEQPGEIRKVRVTVE-----K 74
            |...|:.|:|.:..:|:|||..| :....:.||||.:|.||           ||..|.|     |
Zfish    59 RETRLFSLLSGMRMFGLGRLFTRKSWLDEHTEPCYWKITKV-----------KVDYTAENMDHGK 112

  Fly    75 TW-----RGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVILPT--KIELPPLLREL 132
            .|     ||..:||..|:....|. |:.|||:.:|.::    ::.|||..|.  .:..|||||.:
Zfish   113 AWGVLTFRGKEEPKEREVDKVMYH-DWRLVPKHEEEEF----RRCEPVPEPAARSVRYPPLLRAM 172

  Fly   133 V----SEETG-----NPNPQMKVHYKLTDNK 154
            :    ::|.|     .|.|.:.:...:|.|:
Zfish   173 ILAQQAKEQGVEVSTLPEPLLPLKRVVTLNQ 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS34NP_524104.2 MRP-S34 17..136 CDD:292671 41/135 (30%)
mrps34NP_001007377.2 MRP-S34 60..180 CDD:292671 41/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581792
Domainoid 1 1.000 55 1.000 Domainoid score I11150
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 56 1.000 Inparanoid score I5433
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1475824at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto39361
orthoMCL 1 0.900 - - OOG6_107021
Panther 1 1.100 - - LDO PTHR28589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3868
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.930

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