DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpS34 and MRPS34

DIOPT Version :10

Sequence 1:NP_524104.2 Gene:mRpS34 / 39809 FlyBaseID:FBgn0285951 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001287829.1 Gene:MRPS34 / 65993 HGNCID:16618 Length:225 Species:Homo sapiens


Alignment Length:156 Identity:40/156 - (25%)
Similarity:64/156 - (41%) Gaps:40/156 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RGNTLWELVSNLPNWGVGRLLIR-NMFQRYPEPCYMRILKV------QSVDEQPGEIRKVRVTVE 73
            |.:.|.:|:..||.:|:|||:.| :...::.||||.|:.:|      |::|.            .
Human    60 RESRLLQLLGRLPLFGLGRLVTRKSWLWQHDEPCYWRLTRVRPDYTAQNLDH------------G 112

  Fly    74 KTW------------RGVTQPKPVEIYSTSYKADYELVPQDQEAKYLNNKKKVEPVILPTKIELP 126
            |.|            .|.|:.:..||....|. |:.|||:.:|..:.......|..:  ..:..|
Human   113 KAWGILTFKDASFSSSGKTESEAREIEHVMYH-DWRLVPKHEEEAFTAFTPAPEDSL--ASVPYP 174

  Fly   127 PLLRELVSEE------TGNPNPQMKV 146
            ||||.::..|      |....|.:.|
Human   175 PLLRAMIIAERQKNGDTSTEEPMLNV 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS34NP_524104.2 MRP-S34 17..143 CDD:464995 37/150 (25%)
MRPS34NP_001287829.1 MRP-S34 74..194 CDD:464995 33/134 (25%)

Return to query results.
Submit another query.