DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4998 and teq

DIOPT Version :9

Sequence 1:NP_001036609.1 Gene:CG4998 / 39808 FlyBaseID:FBgn0036612 Length:1185 Species:Drosophila melanogaster
Sequence 2:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster


Alignment Length:1660 Identity:317/1660 - (19%)
Similarity:476/1660 - (28%) Gaps:723/1660 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 QGPPPPSGFSGGPYGPAKPM----PPPSYFSG--RPPMGGPPG---------SYGPPPSSLNSFG 190
            :|..||:..:|| |.|...:    |.||..:|  :||:.|..|         .|.||..|...:.
  Fly  1235 RGYQPPNELNGG-YQPPNELNGAYPAPSQLNGGYQPPLEGNLGYRPLSQQNSGYQPPQPSTGGYQ 1298

  Fly   191 PPPSSVNSFGPPRKVGYEGPY---KPMSGPYRPSG--PG-----GYLEHPPPSAIDG-------- 237
            ||..|..|...|   |.:.||   .|:..|.:.||  |.     |||     :.|||        
  Fly  1299 PPFQSTGSGHYP---GQDAPYAIPTPLLCPEKISGLFPNPFDATGYL-----TCIDGHTLPRQCQ 1355

  Fly   238 -------------------SSDGITYTKPPP-------------GALIYD---SK-----PPGPI 262
                               .:|.:.:.:...             |.::|.   ||     |.|..
  Fly  1356 PLDVFSVSQGYCLPEQHVNKTDRVPFERTQTYQDNSLDCPRDFLGFVVYPFDCSKYLSCGPSGMK 1420

  Fly   263 YTGGP-----SLGAG---PV--------------------------FTGASNGVP-------PY- 285
            ....|     |:..|   ||                          ..||....|       |: 
  Fly  1421 LLNCPGEQHYSISHGFCKPVDQVQREDRLYTINELHIIFEWTQKMMIVGAVTACPEGITGTLPHP 1485

  Fly   286 ---------------------------------------NYENPEGGIQGASSA---PNGFYSQQ 308
                                                   :|:..:..::|.:|.   |:....|.
  Fly  1486 RVPTKYLRCGPGQAEMYDCPSQQIFSVSRRVCVLDDKLSSYDRTDYLVRGVNSGWMDPSNDNRQS 1550

  Fly   309 SSASSA----------SATSSSTKVVVGAPLD---------GLQQHVHHHYH------------H 342
            .|..::          :.|:::|:|:.....|         |::|:.|||:|            :
  Fly  1551 KSYETSGRDQFGNRYTTRTTTTTRVIGDRWTDMNMQRPSGVGVEQNPHHHHHGYNPGWSGQETSY 1615

  Fly   343 VEGG--------EGAKVPSVPIPIGAGQTINTDFSALAQSSATYTPSI----------QTSSGSS 389
            |:.|        ||:..|:...|        |:.:.||..:.|.|..:          ...|..:
  Fly  1616 VQRGPTQSTLYVEGSLQPNRNYP--------TNKTPLAPMAPTNTGGVYYGQPVEDKQNVPSRQN 1672

  Fly   390 YSQSNAFNAGFNGASQGGLLSQNGFGISQKPTGDLYKPNSGDLYKPNSGLGNFGSSSSGGFSGSP 454
            ||:...:.:..||......|...|   .|:|....|.|:|....:|.|                 
  Fly  1673 YSRRIDYGSPGNGWKPMPPLDPLG---GQQPLNLDYSPHSPGAKEPQS----------------- 1717

  Fly   455 SSSYHSQNP---DYYKKELQGGASNQY--NGISGGYQGQ------GQYQSG-YDTSRQQIVDCQC 507
            ..|...|.|   ||.::.:.     ||  ||:. .|.|.      .|..|| ....|||      
  Fly  1718 QDSLPGQKPINLDYDEEPIP-----QYLHNGLP-PYPGSPPRFYPDQLPSGSKPIGRQQ------ 1770

  Fly   508 VPISQCPAADRIGRKEDLILPIDPRN-------------------------LGKDIEALSDDALS 547
             |:...|.|...   .|...|:||.|                         .|..:....|..::
  Fly  1771 -PVESSPDASGY---PDQQKPLDPDNGLHGSKVPPRHSPNPGYPLYNESNLYGGLLPPKPDSPVN 1831

  Fly   548 SNATTTAEAKKDEEKADK-------------DDKKRTRRQADQKDDEASDLSLDAQGRQSPLGGS 599
            :..|.|......:....:             .|.|.:.|...|.....|...: |..|.:|....
  Fly  1832 TTPTPTPNPSSSQAPTPQLANRLHTFPIYPPVDNKTSLRNPIQPHYSPSYAGI-AHSRDAPWAKV 1895

  Fly   600 PL--ALPA-----------------LQAIELIQRKVL--PTYGVSFGLPYPTGGYGGYPSNILGD 643
            |:  ..||                 :..:....|.||  |.:...|..|..|........:..|.
  Fly  1896 PVTSTTPAQDPDPFNPELDEPFYDDVDFLTTTVRNVLVPPPFDHKFYSPQSTNPSINRNQSASGP 1960

  Fly   644 HVPAQ---------NPYFGSVGPNGLNLGLVNVNPLVSVQVAKTEYGEKVVKPLVNLHVTP---- 695
            :..|.         .|||...|.....|.....:.:|||          :.||......||    
  Fly  1961 NSQAAIKEALKLMLRPYFNHSGNAQEQLAQQAESAIVSV----------ISKPSTTTTTTPRPTS 2015

  Fly   696 ---------NANLIQKVG----------DF-------------------------FKRKPTEA-- 714
                     :|.|| |.|          |:                         |:|....|  
  Fly  2016 KTPKTDPDFDAELI-KAGEQESLDSVDDDYVFPDARETSRTEQTLDPSTTYASTNFQRSTRRAEL 2079

  Fly   715 ---------YSTHYHHHDHYSGY------------EHHDYDHHDHHDHHDHHSYPHFYGGTGPGL 758
                     ..|::|...|...|            |||  .:...|.||.||.:||.:..   ..
  Fly  2080 DPDTLTATTMKTNWHAPGHSRDYHRRHPNLPDPFTEHH--PNSSPHQHHHHHRHPHEHSA---DF 2139

  Fly   759 HFSVEMVPSTPIFEYHSGPSVQ----------YHHHHESSP---YESSFNS-------------- 796
            |.....:|: |....:..|..|          ..:..|.:|   ..||||:              
  Fly  2140 HIRHPELPN-PFPLKNETPQHQDLNDDWDLLPNSNAEEVTPKLATRSSFNTQCDFDCGNGQCLKK 2203

  Fly   797 ---------------------------IYPGSSPDFGGYGEYSQHVERSAN-------------- 820
                                       :..|.||:.|       .:|..||              
  Fly  2204 EEICDGKKNCPNGKDEANCPPSDYEVRLSGGESPNMG-------RIEVKANGQWGYVCDDKFGLK 2261

  Fly   821 -----------------VSGGDTDRPSNSG---------RRGKQLNLG----------------- 842
                             |.|.....|.|..         ..|.:..||                 
  Fly  2262 DADVVCRELGFQMGAQEVRGSSFYAPPNQDFNYLMDEVECHGNETKLGQCAFKGWGVHNCGVDEV 2326

  Fly   843 -------PLYNIPT-------------PA------PGEAAGSDR--------ITFPRDRRRRSVE 873
                   |:...|.             ||      |..|..||.        :.:..:..|.|.|
  Fly  2327 AGVTCKVPVMKCPNNYWLCHTSKECIPPAFVCDNTPDCADKSDECAAVCQAPVQYRLEGGRNSNE 2391

  Fly   874 -------DGVWAGAAPKE-----------QRAYYGNRPVEKT---------------CRINEV-- 903
                   .|||......:           ...::|...:||.               |..||.  
  Fly  2392 GRLEVKHHGVWGSVCDDDFNLKSAQVACNSMGFFGPAKIEKNIFGNSNGPIWLDQVMCFGNETSI 2456

  Fly   904 ----------------------CCRRPLRPQAPPQ-------------------------QFG-- 919
                                  |...|     ||:                         |.|  
  Fly  2457 DQCNHWNWGEHNCNHTEDVALHCSAGP-----PPRSQRYSQTQIKGGRSLGRETTPKTYSQIGLW 2516

  Fly   920 -----------RCGV-----------RNAAGITGRIKNPVYVDGDSEFGEYPWHVAILKKDPKE- 961
                       |||:           |....:.|.:         ::.|.:||...|..:.... 
  Fly  2517 ERSSKAVHTPRRCGIFKDDLTDEYAHREERVVRGNV---------AQRGRHPWQATIRTRGRGGI 2572

  Fly   962 SIYACGGTLIDAQHIISAAHCIKSQNGFDLRVRLGEWDVN----HDVEFFPYIERDVVSVHIHPE 1022
            |.:.||..:|..:|:::||||:.........||:|:...|    .:|:.|      :.:.::|..
  Fly  2573 SSHWCGAVVISKRHLLTAAHCLYGSPKGAYFVRVGDHYANIAESSEVDSF------IENWYLHEN 2631

  Fly  1023 YYAGT-LDNDLAVLKLDQPVDFTKNPHISPACLPDKYSDFTGAR-CWTTGWGKDAFGEHGKYQNI 1085
            :..|| ::||:|::.|..|:.|  :.::.|.|||||.::....| |..:|||....|.....| :
  Fly  2632 FRKGTHMNNDIALVVLKTPLKF--SDYVQPICLPDKNAELVEDRKCTISGWGSIKSGVSTPAQ-V 2693

  Fly  1086 LKEVDVPILSHQQCESQLRNTRLGYSYKLNPGFVCAGG-EEGKDACKGDGGGPLVCDRNGAMHVV 1149
            |...::|||:...|:..  |.   |...::.|..|||. :|..|||:||.||||||..:....:.
  Fly  2694 LGSAELPILADHVCKQS--NV---YGSAMSEGMFCAGSMDESVDACEGDSGGPLVCSDDDGETLY 2753

  Fly  1150 GVVSWGIGCGQVNVPGVYVKVSAYLPWI-QQITQS 1183
            |::|||..||..|.|||||:|:.|:.|| ::|.:|
  Fly  2754 GLISWGQHCGFKNRPGVYVRVNHYIDWIYEKINES 2788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4998NP_001036609.1 Tryp_SPc 942..1180 CDD:238113 80/246 (33%)
Tryp_SPc 942..1177 CDD:214473 78/242 (32%)
teqNP_648288.2 CBM_14 65..115 CDD:279884
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
CBM_14 521..569 CDD:279884
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..830 CDD:279884
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:279884
RCR <1051..1126 CDD:304939
RCR <1116..1210 CDD:304939
ChtBD2 1324..1369 CDD:214696 10/49 (20%)
ChtBD2 1474..1518 CDD:214696 2/43 (5%)
LDLa 2193..2222 CDD:238060 0/28 (0%)
SR 2229..2331 CDD:214555 14/108 (13%)
SRCR 2234..2332 CDD:278931 14/104 (13%)
LDLa 2337..2370 CDD:197566 6/32 (19%)
SR 2382..2480 CDD:214555 12/97 (12%)
SRCR 2386..2480 CDD:278931 12/93 (13%)
Tryp_SPc 2546..2781 CDD:214473 79/257 (31%)
Tryp_SPc 2547..2784 CDD:238113 81/259 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.