DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4998 and mas

DIOPT Version :10

Sequence 1:NP_001036609.1 Gene:CG4998 / 39808 FlyBaseID:FBgn0036612 Length:1185 Species:Drosophila melanogaster
Sequence 2:NP_523919.1 Gene:mas / 38499 FlyBaseID:FBgn0011653 Length:1047 Species:Drosophila melanogaster


Alignment Length:486 Identity:132/486 - (27%)
Similarity:199/486 - (40%) Gaps:118/486 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   766 PSTPIFEYHS-----GPSVQYHHHHESSPYE-----SSFNSIYPGSSP----------------- 803
            |.||.:.|.:     ||..|...|| .:||:     .::...||.|.|                 
  Fly   603 PQTPPYSYMNNPPPQGPPPQMAPHH-PNPYQPPPPAPNYADYYPVSGPGLPPQPQPPMTTPPTTT 666

  Fly   804 ------------------------------DFGGYGEYSQHVERSANVSGGDTDRPSNSGRRGKQ 838
                                          .|..|......|:|:|...........|..:..::
  Fly   667 TTTTTPRPHVYSKYVCGVKGTLRTGRSQALSFVSYARAKYGVQRTARQMTSAAGYSPNFNKSNER 731

  Fly   839 LNLG----PLYNIPTPAPGEAAGSDRITFPRDRRRRSVEDGVWAGAAPK-------EQRAYYGNR 892
            |.||    |: .|.....|:...|..:   :..:.||..:.......|.       :||:.||.:
  Fly   732 LVLGSAIVPI-QIHNDKLGDLVESSSL---QSNQLRSYHNHQAQADQPDLVYPEYYQQRSLYGLQ 792

  Fly   893 PVEKTCRINEVCCRRPLRPQAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGEYPWHVAILKK 957
                                              :..:||.:..|....|.|.||:.|.||::. 
  Fly   793 ----------------------------------SNFSGRRRARVVGGEDGENGEWCWQVALIN- 822

  Fly   958 DPKESIYACGGTLIDAQHIISAAHCIKS--QNGFDLRVRLGEWDVNHDVEFFPYIERDVVSVHIH 1020
              ..:.|.||..||..|.:::||||:.:  ::|..:.||:|::|:.............|.:.:||
  Fly   823 --SLNQYLCGAALIGTQWVLTAAHCVTNIVRSGDAIYVRVGDYDLTRKYGSPGAQTLRVATTYIH 885

  Fly  1021 PEYYAGTLDNDLAVLKLDQPVDFTKNPHISPACLPDK-YSDFTGARCWTTGWGKDAFGEHGKYQN 1084
            ..:.:.|||||:|:|||....:....  :...|||.: .|...|.||..||:|  ..||.|....
  Fly   886 HNHNSQTLDNDIALLKLHGQAELRDG--VCLVCLPARGVSHAAGKRCTVTGYG--YMGEAGPIPL 946

  Fly  1085 ILKEVDVPILSHQQCESQLRNTRLGYSYKLNPGFVCAGGEEGKDACKGDGGGPLVCDRNGAMHVV 1149
            .::|.::||:|..:|..:: |......:.|.....|||||||.|||:|||||||||..:|...:.
  Fly   947 RVREAEIPIVSDTECIRKV-NAVTEKIFILPASSFCAGGEEGHDACQGDGGGPLVCQDDGFYELA 1010

  Fly  1150 GVVSWGIGCGQVNVPGVYVKVSAYLPWIQQI 1180
            |:||||.|||:.:|||||||.|:::.||.||
  Fly  1011 GLVSWGFGCGRQDVPGVYVKTSSFIGWINQI 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4998NP_001036609.1 Tryp_SPc 942..1180 CDD:238113 92/240 (38%)
masNP_523919.1 CLIP_SPH_mas 55..87 CDD:465746
CLIP_SPH_mas 192..224 CDD:465746
CLIP_SPH_mas 343..374 CDD:465746
CLIP_SPH_mas 457..492 CDD:465746
CLIP_SPH_mas 532..567 CDD:465746
Tryp_SPc 803..1041 CDD:238113 93/245 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.