DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4998 and CG18563

DIOPT Version :10

Sequence 1:NP_001036609.1 Gene:CG4998 / 39808 FlyBaseID:FBgn0036612 Length:1185 Species:Drosophila melanogaster
Sequence 2:NP_609841.2 Gene:CG18563 / 35050 FlyBaseID:FBgn0032639 Length:379 Species:Drosophila melanogaster


Alignment Length:433 Identity:116/433 - (26%)
Similarity:178/433 - (41%) Gaps:113/433 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   756 PGLHFSVEMVPSTPIFEYHSGPSVQYHHHHESSPYESSFNSIYPGSSPDFGGYGEYSQHVERSAN 820
            |..|...:::..:|...  |||       :|.|..||:.:|....:.|.|..:            
  Fly    41 PFNHVCCDIIIKSPYIP--SGP-------NEESDSESASSSTEEENIPTFIYF------------ 84

  Fly   821 VSGGDTDRPSNSGRRGKQLNLGPLYNIPT---PAPGEAAGSDRITFPRDRRRRSVEDGVWAGAAP 882
                 ..||:.|......::..|  ::|.   |..|..|.::              ||     |.
  Fly    85 -----PTRPTVSSEPQNNVSTEP--DVPITYWPLKGSGAPTN--------------DG-----AQ 123

  Fly   883 KEQRAYYGNRPVEKTCRINEVCCRRPLRPQAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGE 947
            .||     .:|.|:|                  |..|||   |..|:                  
  Fly   124 AEQ-----PKPTERT------------------QPGGRC---NTTGL------------------ 144

  Fly   948 YPWHVAILKKDPKESIYACGGTLIDAQHIISAAH-CIKSQNGFDLRVRLGEWDVNHDVEFFPYIE 1011
            |.|.||:.    .|.:|..||:||..:.|::||| .:...|...:.||.||:.:|...|...|.|
  Fly   145 YSWVVALF----YEEVYLTGGSLISPKVILTAAHNTMNKMNEDRIVVRAGEFVMNTTNEPIQYEE 205

  Fly  1012 RDVVSVHIHPEYYAGTLDNDLAVLKLDQPVDFTKNPHISPACLPDKYSDFTGARCWTTGWGKDAF 1076
            |.|..:..|..:...:..|::|::.:..|  |..|..|....||.:.:.|.|.||...||  |..
  Fly   206 RVVERIVRHEGFIFQSGINNVALIFVKTP--FVLNDRIGVLTLPSRQASFEGRRCTVAGW--DLV 266

  Fly  1077 GEHGKYQ-NILKEVDVPILSHQQCESQLRNTRLGYSYKLNPGFVCAGGEEGKDACKGDGGGPLVC 1140
            ..|.:.: .|:|::::.:|....|.:|.|||.||.::.|:|..:||..|..:|.|.|.||..|.|
  Fly   267 SSHDQSRMRIIKKLELTVLDRTTCVAQFRNTTLGRNFDLHPSLICARSEINRDFCFGGGGYALFC 331

  Fly  1141 ---DRNGAMHV---VGVVSWGIGCGQVNVPGVYVKVSAYLPWI 1177
               |.|  .||   .|:|:||:||| :::||:|..|:.:..||
  Fly   332 SLGDEN--PHVFEQAGIVAWGMGCG-LDLPGIYTNVAMFRSWI 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4998NP_001036609.1 Tryp_SPc 942..1180 CDD:238113 81/244 (33%)
CG18563NP_609841.2 Tryp_SPc 147..371 CDD:214473 78/234 (33%)

Return to query results.
Submit another query.