DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4998 and CG32260

DIOPT Version :9

Sequence 1:NP_001036609.1 Gene:CG4998 / 39808 FlyBaseID:FBgn0036612 Length:1185 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:419 Identity:122/419 - (29%)
Similarity:182/419 - (43%) Gaps:94/419 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   829 PSNSGRR-----------------GKQLNLGPLYNIPTPAPGEA-----------AGSDRITF-- 863
            |.|||||                 |..|.|.....:.....|:|           .|.|..||  
  Fly   178 PLNSGRRRRRRRRPQSCQDARSRPGSCLPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMV 242

  Fly   864 ----PRDRRRRSVEDGVWAGAAPKEQRAYYGNRPV-----------EKTCRINEVCCRR--PLRP 911
                .|....||.:|.....|||   ..::...|:           :.|..:::|....  |..|
  Fly   243 CCATDRSGNARSRKDVFVTTAAP---FGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPP 304

  Fly   912 QAPPQQFGRCGVRNAAGITGRIKNPVYVDGDSEFGEYPWHVAI--LKKDPKESI-YACGGTLIDA 973
            ..||....|...  ..||:|...|.|....::..|.|||..|:  .:::.:.:: :.|||:||.:
  Fly   305 PPPPNNAPRESA--TCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHS 367

  Fly   974 QHIISAAHCIKSQNGFDLRVRLGEWDVNHDVEFFPY---IERDVVSVHIHPEYYAGTLDNDLAVL 1035
            :::|::||||   |.....||||..|::...|....   |.|.||    |..:...::.||:|::
  Fly   368 RYVITSAHCI---NPMLTLVRLGAHDLSQPAESGAMDLRIRRTVV----HEHFDLNSISNDIALI 425

  Fly  1036 KLDQPVDFTKNPHISPACLPD--KY--SDFTGARCWTTGWGKDAFGEHGKYQNILKEVDVPILSH 1096
            :|:.......|  |||.|||:  |:  .||.|...:..|||  |....|....:|::..|||:|.
  Fly   426 ELNVVGALPGN--ISPICLPEAAKFMQQDFVGMNPFVAGWG--AVKHQGVTSQVLRDAQVPIVSR 486

  Fly  1097 QQCESQLRNTRLGYSYKLNPGFV-------CAGGEEGKDACKGDGGGPLVCDR-NG---AMHVVG 1150
            ..||.         |||....||       || |....|||:||.||||:..: .|   ..:::|
  Fly   487 HSCEQ---------SYKSIFQFVQFSDKVLCA-GSSSVDACQGDSGGPLMMPQLEGNVYRFYLLG 541

  Fly  1151 VVSWGIGCGQVNVPGVYVKVSAYLPWIQQ 1179
            :||:|..|.:.|.||||.:|::|:|||::
  Fly   542 LVSFGYECARPNFPGVYTRVASYVPWIKK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4998NP_001036609.1 Tryp_SPc 942..1180 CDD:238113 87/259 (34%)
Tryp_SPc 942..1177 CDD:214473 85/255 (33%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855 9/49 (18%)
Tryp_SPc 327..568 CDD:214473 86/261 (33%)
Tryp_SPc 328..571 CDD:238113 88/264 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456172
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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