DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13040 and CG13056

DIOPT Version :9

Sequence 1:NP_001261936.1 Gene:CG13040 / 39804 FlyBaseID:FBgn0036608 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_652414.2 Gene:CG13056 / 50267 FlyBaseID:FBgn0040794 Length:99 Species:Drosophila melanogaster


Alignment Length:70 Identity:23/70 - (32%)
Similarity:31/70 - (44%) Gaps:13/70 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAICAL----ATIVAAAPGFIEEHPVAVAPVVAKVGAVVHSAPLATSHQSFTQYHNQ-----AVL 60
            :.:|.|    |.:....|.....||    |..||||.:|...|.|.||||.|..|..     ::|
  Fly    11 LLLCLLALGNADLQLYHPLMTLHHP----PTFAKVGHLVEHVPTAVSHQSSTIVHRSVPRTTSLL 71

  Fly    61 TPVVK 65
            ||.::
  Fly    72 TPALR 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13040NP_001261936.1 Retinin_C <40..94 CDD:282395 11/31 (35%)
CG13056NP_652414.2 Retinin_C 34..>83 CDD:282395 19/47 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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