DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13040 and CG13062

DIOPT Version :10

Sequence 1:NP_648875.1 Gene:CG13040 / 39804 FlyBaseID:FBgn0036608 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster


Alignment Length:79 Identity:34/79 - (43%)
Similarity:38/79 - (48%) Gaps:19/79 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 HHQTYVAPAV----HHVAAVPVVKALPHAVSHQSHTQVH---HQKTIITPVVAP-VVKTV----- 172
            ||..|  |.:    ||....|:...||.||||||.|.||   |.  ||.||:.| |||||     
  Fly    25 HHHHY--PEIPYYPHHHHVEPLHYHLPAAVSHQSSTVVHSVPHH--IIKPVLLPTVVKTVVHPPI 85

  Fly   173 --AVAAAPVAHVYH 184
              |...||:...||
  Fly    86 IKAYHPAPIIKAYH 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13040NP_648875.1 PHA02030 <66..120 CDD:222843
CG13062NP_648871.3 Retinin_C 40..95 CDD:427994 26/56 (46%)
Blue background indicates that the domain is not in the aligned region.

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