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Protein Alignment CG13040 and CG13063
DIOPT Version :9
Sequence 1: | NP_001261936.1 |
Gene: | CG13040 / 39804 |
FlyBaseID: | FBgn0036608 |
Length: | 185 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_648869.1 |
Gene: | CG13063 / 39797 |
FlyBaseID: | FBgn0036601 |
Length: | 129 |
Species: | Drosophila melanogaster |
Alignment Length: | 154 |
Identity: | 55/154 - (35%) |
Similarity: | 71/154 - (46%) |
Gaps: | 45/154 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFRFIAICALATIVAAAPGFIEEHP-VAVAPV---------VAKVGAVVHSAPLATSHQSFTQYH 55
||:.:.:.||..:..|.||.:.|.| |..||. :||||:||.|.|.:.||||.:..|
Fly 1 MFKLVVLSALLAVAVARPGHLYESPLVYAAPAATTVVQERSLAKVGSVVSSIPTSVSHQSQSVVH 65
Fly 56 NQAVLTPVVKHVVPAVPVIKTVAPVV---PVVKHVAPIVPVVKQVAPIVPVVKHVAPVVPVIKTV 117
:.: |||..: ||||| |||.:.| .||:|......||||
Fly 66 SHS-------HVVEDI-----VAPVVKSTPVVSYAA--------AAPVVHTAYAAAPVV------ 104
Fly 118 PVVHHQTYVAPAVH--HVAAVPVV 139
|.:|.||.|| :.||.|||
Fly 105 ----HTSYAAPVVHTSYAAASPVV 124
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG13040 | NP_001261936.1 |
Retinin_C |
<40..94 |
CDD:282395 |
19/56 (34%) |
CG13063 | NP_648869.1 |
rne |
<11..124 |
CDD:236766 |
49/142 (35%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR34931 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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