DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13040 and CG4982

DIOPT Version :9

Sequence 1:NP_001261936.1 Gene:CG13040 / 39804 FlyBaseID:FBgn0036608 Length:185 Species:Drosophila melanogaster
Sequence 2:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster


Alignment Length:61 Identity:22/61 - (36%)
Similarity:31/61 - (50%) Gaps:7/61 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PAVHHVAAVPVV-----KALPHAVSHQSHTQVHHQKTIITPVV--APVVKTVAVAAAPVAH 181
            |:..||...|.|     .|||.||||||.|.||.::....|:|  .|::|.....|..:::
  Fly    24 PSYEHVEYAPSVVGYESYALPAAVSHQSSTVVHEKRPYWRPIVDHTPILKAAYAPATSISY 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13040NP_001261936.1 Retinin_C <40..94 CDD:282395
CG4982NP_648866.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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