DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13059 and CG13062

DIOPT Version :9

Sequence 1:NP_648874.2 Gene:CG13059 / 39803 FlyBaseID:FBgn0036607 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster


Alignment Length:165 Identity:38/165 - (23%)
Similarity:59/165 - (35%) Gaps:69/165 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VAFFACLAVAAAAPGLI------------AETHSIVQPAILAKTAYVDTSASSAITHQSNVNLVR 57
            |:..:..|:.||.||.:            ...|..|:|        :.....:|::|||:.    
  Fly     6 VSLLSICALTAARPGFLHGHHHHYPEIPYYPHHHHVEP--------LHYHLPAAVSHQSST---- 58

  Fly    58 KVPVVYSAPVVHAAPVVHAAP--LVKTVIPAAPLVKTVIPAAPVLKTVVSSAPLVHTVVPAAPLV 120
                           |||:.|  ::|.|:         :|.  |:||||.           .|::
  Fly    59 ---------------VVHSVPHHIIKPVL---------LPT--VVKTVVH-----------PPII 86

  Fly   121 KTVIPAAPVIKTVIPAAPL-VHTVHSAPVVYSAYH 154
            |...| ||:||...|..|. :|..|.    :..||
  Fly    87 KAYHP-APIIKAYHPYDPFHLHHHHD----FHDYH 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13059NP_648874.2 rne <22..152 CDD:236766 30/132 (23%)
CG13062NP_648871.3 Retinin_C 32..95 CDD:282395 24/112 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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