DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13060 and CG34267

DIOPT Version :9

Sequence 1:NP_648873.1 Gene:CG13060 / 39802 FlyBaseID:FBgn0036606 Length:131 Species:Drosophila melanogaster
Sequence 2:NP_001097464.1 Gene:CG34267 / 5740365 FlyBaseID:FBgn0085296 Length:77 Species:Drosophila melanogaster


Alignment Length:113 Identity:38/113 - (33%)
Similarity:44/113 - (38%) Gaps:39/113 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFIGVIALLVATASA--GLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVHSKAVVQPVV 63
            ||:.|.||..|||.|.|  |.||..:.| .|| |:|..||.|.|               |||.| 
  Fly     1 MFRIIAVIFALVAMAFAAPGYIEPSYGV-VPV-AQVVPVVKSVP---------------VVQHV- 47

  Fly    64 APIVKTTTYSHPAVAVHAAPVVHSVPVVHAAPVVHSVHSAPVVHSVLH 111
                               |||.:||||...||:.|.......|.:.|
  Fly    48 -------------------PVVKNVPVVQHVPVLKSYAVPTYGHHIYH 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13060NP_648873.1 Retinin_C 25..>73 CDD:282395 13/47 (28%)
CG34267NP_001097464.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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