DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13042 and CG34267

DIOPT Version :9

Sequence 1:NP_648870.1 Gene:CG13042 / 39798 FlyBaseID:FBgn0036602 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001097464.1 Gene:CG34267 / 5740365 FlyBaseID:FBgn0085296 Length:77 Species:Drosophila melanogaster


Alignment Length:96 Identity:30/96 - (31%)
Similarity:50/96 - (52%) Gaps:21/96 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYKLV-VFFALLAVVAARPGYLESGPLLHSYAAPAIIHEPALAKVGAIIKTVPSAVSHQSISQVH 64
            |:::: |.|||:|:..|.|||:|.     ||....:      |:|..::|:|| .|.|..:.:  
  Fly     1 MFRIIAVIFALVAMAFAAPGYIEP-----SYGVVPV------AQVVPVVKSVP-VVQHVPVVK-- 51

  Fly    65 SSAHIIQPIVAPVVKTYAAPIIKTYAAPALH 95
             :..::|.:  ||:|:||.|   ||.....|
  Fly    52 -NVPVVQHV--PVLKSYAVP---TYGHHIYH 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13042NP_648870.1 Retinin_C 35..93 CDD:309599 16/57 (28%)
CG34267NP_001097464.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.