DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13063 and retinin

DIOPT Version :10

Sequence 1:NP_648869.1 Gene:CG13063 / 39797 FlyBaseID:FBgn0036601 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_524995.2 Gene:retinin / 53564 FlyBaseID:FBgn0040074 Length:191 Species:Drosophila melanogaster


Alignment Length:64 Identity:31/64 - (48%)
Similarity:43/64 - (67%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PLVYAAP---AATTVVQERSLAKVGSVVSSIPTSVSHQSQSVVHSHSHVVEDIVAPVVKSTPVV 85
            ||:.||.   .....:||.::||||.||..:||:||||:|:|||.|..:|..||||.|::|.|:
  Fly   107 PLILAARNGLRTVLTIQEPAVAKVGEVVQHVPTAVSHQTQTVVHDHRRLVTPIVAPAVRTTQVI 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13063NP_648869.1 rne <11..124 CDD:236766 31/64 (48%)
retininNP_524995.2 Retinin_C 122..>169 CDD:427994 26/46 (57%)

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