DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13063 and retinin

DIOPT Version :9

Sequence 1:NP_648869.1 Gene:CG13063 / 39797 FlyBaseID:FBgn0036601 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_524995.2 Gene:retinin / 53564 FlyBaseID:FBgn0040074 Length:191 Species:Drosophila melanogaster


Alignment Length:64 Identity:31/64 - (48%)
Similarity:43/64 - (67%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PLVYAAP---AATTVVQERSLAKVGSVVSSIPTSVSHQSQSVVHSHSHVVEDIVAPVVKSTPVV 85
            ||:.||.   .....:||.::||||.||..:||:||||:|:|||.|..:|..||||.|::|.|:
  Fly   107 PLILAARNGLRTVLTIQEPAVAKVGEVVQHVPTAVSHQTQTVVHDHRRLVTPIVAPAVRTTQVI 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13063NP_648869.1 rne <11..124 CDD:236766 31/64 (48%)
retininNP_524995.2 Retinin_C 122..>169 CDD:309599 26/46 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470233
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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