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Protein Alignment CG13043 and retinin
DIOPT Version :9
Sequence 1: | NP_648868.2 |
Gene: | CG13043 / 39796 |
FlyBaseID: | FBgn0036600 |
Length: | 148 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_524995.2 |
Gene: | retinin / 53564 |
FlyBaseID: | FBgn0040074 |
Length: | 191 |
Species: | Drosophila melanogaster |
Alignment Length: | 83 |
Identity: | 38/83 - (45%) |
Similarity: | 51/83 - (61%) |
Gaps: | 6/83 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 PLVYAAP---AATTIVQEPVLAKVGAVVKSVPTAVSHQSQSVVHSHAHVVEDVVAPVVKSTPVVS 87
||:.||. .....:|||.:||||.||:.||||||||:|:|||.|..:|..:|||.|::|.|:
Fly 107 PLILAARNGLRTVLTIQEPAVAKVGEVVQHVPTAVSHQTQTVVHDHRRLVTPIVAPAVRTTQVI- 170
Fly 88 YAAAAPVVHTSYAAAPVV 105
...|.:..|.|:.|.|
Fly 171 --RQQPPLLWSVASDPRV 186
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45470234 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR34931 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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