DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13043 and CG34205

DIOPT Version :9

Sequence 1:NP_648868.2 Gene:CG13043 / 39796 FlyBaseID:FBgn0036600 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_001097407.1 Gene:CG34205 / 37526 FlyBaseID:FBgn0085234 Length:217 Species:Drosophila melanogaster


Alignment Length:190 Identity:68/190 - (35%)
Similarity:88/190 - (46%) Gaps:58/190 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KLVVLSALLAVAAARPGHLLE---------------------SSPLV--YAAPAATTIVQEPVLA 44
            ||::|::|||||.|.|| ||:                     ::|::  |||||.|.....||:.
  Fly    24 KLLILTSLLAVATAAPG-LLDYGHSAPDYSYAHAAPAITYAAAAPVIKSYAAPAITYAAPAPVIK 87

  Fly    45 KVGA------------------VVKS--VPTAVSHQSQSVVHSHAHVVEDVVAPVVKS--TPVVS 87
            ...|                  ||||  .|.||...:.:..:||...|.....|:|||  .|.::
  Fly    88 SYAAPAISYAHAAPAISYAAPTVVKSYAAPVAVKVAAPATSYSHFSSVVSHATPIVKSYAAPAIA 152

  Fly    88 YAAAAPVVHTSYAAAPVVHTSYAAP-----APVVHTSYAA-----AAPVLATSYAQVAAS 137
            |||.|||: .|| |||.:..::|||     ||.|..||||     |||.|..|||..|.|
  Fly   153 YAAPAPVI-KSY-AAPAISYAHAAPAISYAAPTVVKSYAAPAISYAAPALVKSYAAPALS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13043NP_648868.2 Retinin_C 37..105 CDD:282395 29/89 (33%)
CG34205NP_001097407.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2D4X2
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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