DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13044 and CG34268

DIOPT Version :9

Sequence 1:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001097465.1 Gene:CG34268 / 5740141 FlyBaseID:FBgn0085297 Length:83 Species:Drosophila melanogaster


Alignment Length:104 Identity:39/104 - (37%)
Similarity:52/104 - (50%) Gaps:29/104 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLF-VLAALLAVAAAKPGHLAAAPLVYSAPATTTVVQEPVLAKVGAVVKSVPTAVSHQSLTQV 64
            ||::. |:.||:|:|.|.||        |..|:...|   || |:|..|||||| .|.|      
  Fly     1 MFRIIAVIFALVAMAFAAPG--------YIEPSYGVV---PV-AQVVPVVKSVP-VVKH------ 46

  Fly    65 HSTPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAY 103
              .|||:.|  ||||     :.||:...|::|:.|...|
  Fly    47 --VPVVQHV--PVVK-----NVPVVQHVPVLKSYAVPTY 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13044NP_648867.1 Retinin_C 36..93 CDD:282395 23/56 (41%)
CG34268NP_001097465.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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