DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13044 and CG13060

DIOPT Version :10

Sequence 1:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_648873.1 Gene:CG13060 / 39802 FlyBaseID:FBgn0036606 Length:131 Species:Drosophila melanogaster


Alignment Length:153 Identity:76/153 - (49%)
Similarity:94/153 - (61%) Gaps:30/153 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLFVLAALLAVAAAKPGHLAAAPLVYSAPATTTVVQEPVLAKVGAVVKSVPTAVSHQSLTQVH 65
            |||...:.||| ||.|..|.:          .|..||.||||||||:||.|.|:||||||:||||
  Fly     1 MFKFIGVIALL-VATASAGLI----------ETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVH 54

  Fly    66 STPVVEDVVAPVVKTT-------AVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVAYS-SYAAPL 122
            |..||:.||||:||||       |||:|||:.:.|:|.. |||.:|   .:||||.:| .::|||
  Fly    55 SKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSVPVVHA-APVVHS---VHSAPVVHSVLHSAPL 115

  Fly   123 TYSAPVAYSAPLSYAAPAPLLHH 145
            ..|  |.:||||:|.     |||
  Fly   116 VKS--VVHSAPLAYT-----LHH 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13044NP_648867.1 Retinin_C 36..102 CDD:427994 45/72 (63%)
CG13060NP_648873.1 Retinin_C 25..>73 CDD:427994 35/47 (74%)

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