DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13044 and CG13041

DIOPT Version :10

Sequence 1:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_648872.1 Gene:CG13041 / 39801 FlyBaseID:FBgn0036605 Length:124 Species:Drosophila melanogaster


Alignment Length:152 Identity:73/152 - (48%)
Similarity:89/152 - (58%) Gaps:35/152 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLFVLAALLAVAAAKPGHLAAAPLVYSAPATTTVVQEPVLAKVGAVVKSVPTAVSHQSLTQVH 65
            |||...:.||| ||.|..|.:          .|..||.||||||||:||.|.|:||||||:||||
  Fly     1 MFKFVAVIALL-VATASAGLI----------ETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVH 54

  Fly    66 STPVVEDVVAPVVKTT-------AVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVAYSSYAAPLT 123
            |..||:.||||:||||       |||:|||:.:.|:|.. |||.:|.||.:|||:..|       
  Fly    55 SKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSVPVVHA-APVVHSVPLVHSAPLVKS------- 111

  Fly   124 YSAPVAYSAPLSYAAPAPLLHH 145
                |.:||||:|.     |||
  Fly   112 ----VVHSAPLAYT-----LHH 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13044NP_648867.1 Retinin_C 36..102 CDD:427994 45/72 (63%)
CG13041NP_648872.1 Retinin_C 25..>73 CDD:427994 35/47 (74%)

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