DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13044 and LOC1276816

DIOPT Version :10

Sequence 1:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_316208.3 Gene:LOC1276816 / 1276816 VectorBaseID:AGAMI1_012964 Length:128 Species:Anopheles gambiae


Alignment Length:143 Identity:65/143 - (45%)
Similarity:84/143 - (58%) Gaps:31/143 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLFVLAALLAVAAAKPGHLA-AAPLVYSAPAT----------TTVVQEPVLAKVGAVVKSVPT 54
            |.||.||:|:|||.||:||.|. :|||.| ||||          .::::||.:|.||::||::||
Mosquito     1 MLKLVVLSAVLAVVAARPGALTYSAPLAY-APATLIAKPEIYYQKSIIEEPTVAHVGSLVKTIPT 64

  Fly    55 AVSHQSLTQVH-STPVVEDVVAPVVKTTAVHSAPVLAAAPIVKTLAPVAYSAPLAYSAPVAYSSY 118
            ||||||.|.|| |..:.|.:.||.||.|       |.:.||.||    .|     ::||.|| :|
Mosquito    65 AVSHQSSTVVHNSAKITEPIYAPAVKQT-------LVSTPIAKT----TY-----FAAPAAY-AY 112

  Fly   119 AAP-LTYSAPVAY 130
            ||| |.|....||
Mosquito   113 AAPALAYHDAYAY 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13044NP_648867.1 Retinin_C 36..102 CDD:427994 30/66 (45%)
LOC1276816XP_316208.3 Retinin_C 46..103 CDD:427994 30/67 (45%)

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