DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13044 and LOC1276815

DIOPT Version :10

Sequence 1:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_316207.5 Gene:LOC1276815 / 1276815 VectorBaseID:AGAMI1_009649 Length:196 Species:Anopheles gambiae


Alignment Length:198 Identity:91/198 - (45%)
Similarity:110/198 - (55%) Gaps:46/198 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKLFVLAALLAVAAAKPG--HLA-AAPLVYS-----APATT---------TVVQEPVLAKVGAV 48
            ||:|.||:||||||||.||  ||. :|||.||     |||..         ::|:||.:|.||.|
Mosquito     1 MFRLVVLSALLAVAAAAPGAHHLVHSAPLAYSTVVAAAPALVAQKEISYQKSIVEEPAVAHVGTV 65

  Fly    49 VKSVPTAVSHQSLTQVHSTPVVEDVVAPVVKTTAVHSAP------VLAAAPIVKTLAPVAYSAPL 107
            ||:|||.|:|.|...||.|.|.|||.||.||.|.| |.|      |.||||:|.. ||..|:||:
Mosquito    66 VKTVPTGVTHTSSAVVHDTKVREDVYAPAVKKTVV-STPVEKTTYVQAAAPVVHA-APAVYAAPV 128

  Fly   108 -------------AYSAPV--AYSSYAAPLTYS---APVAYSAPL--SYAAPAPLLHHAPLTYAA 152
                         ||:|||  .|:..|||...|   |||||:|||  :|.:..|.::.||..| |
Mosquito   129 QTVYAAAPVAKTYAYAAPVEKTYTYAAAPAAISYEAAPVAYAAPLKTAYVSSYPSVYAAPAVY-A 192

  Fly   153 GSW 155
            ..|
Mosquito   193 NQW 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13044NP_648867.1 Retinin_C 36..102 CDD:427994 38/71 (54%)
LOC1276815XP_316207.5 None

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