DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4982 and CG34268

DIOPT Version :10

Sequence 1:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_001097465.1 Gene:CG34268 / 5740141 FlyBaseID:FBgn0085297 Length:83 Species:Drosophila melanogaster


Alignment Length:83 Identity:25/83 - (30%)
Similarity:38/83 - (45%) Gaps:14/83 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKVVFLLCGVFAVLIQARPSYL-PSYEHVEYAPSVVGYESYALPAAVSH----QSSTVVHEKRP 60
            ||:::.::..:.|:.. |.|.|: |||..|..|..|...:|..:   |.|    |...||...  
  Fly     1 MFRIIAVIFALVAMAF-AAPGYIEPSYGVVPVAQVVPVVKSVPV---VKHVPVVQHVPVVKNV-- 59

  Fly    61 YWRPIVDHTPILKAAYAP 78
               |:|.|.|:||:...|
  Fly    60 ---PVVQHVPVLKSYAVP 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4982NP_648866.1 Retinin_C 36..82 CDD:427994 13/47 (28%)
CG34268NP_001097465.1 None

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