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Protein Alignment CG4982 and retinin
DIOPT Version :9
Sequence 1: | NP_648866.1 |
Gene: | CG4982 / 39794 |
FlyBaseID: | FBgn0036598 |
Length: | 113 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_524995.2 |
Gene: | retinin / 53564 |
FlyBaseID: | FBgn0040074 |
Length: | 191 |
Species: | Drosophila melanogaster |
Alignment Length: | 83 |
Identity: | 28/83 - (33%) |
Similarity: | 37/83 - (44%) |
Gaps: | 18/83 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 EYAPSVVGYESYALPAAVSHQSSTVVHEKRPYWRPIVDHTPILKAAYAPATSISYAPLGYAGNSA 94
|.|.:.||.....:|.|||||:.||||:.| |.: |||:..|......|...|
Fly 124 EPAVAKVGEVVQHVPTAVSHQTQTVVHDHR---RLV---TPIVAPAVRTTQVIRQQP-------- 174
Fly 95 GWYEPGIWGVSSYPSIYL 112
|.:|.|:|.|.:.|
Fly 175 ----PLLWSVASDPRVVL 188
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG4982 | NP_648866.1 |
None |
retinin | NP_524995.2 |
Retinin_C |
122..>169 |
CDD:309599 |
20/50 (40%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR34931 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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