DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4982 and CG13060

DIOPT Version :9

Sequence 1:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_648873.1 Gene:CG13060 / 39802 FlyBaseID:FBgn0036606 Length:131 Species:Drosophila melanogaster


Alignment Length:118 Identity:39/118 - (33%)
Similarity:62/118 - (52%) Gaps:18/118 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKVVFLLCGVFAVLIQARPSYLPSYEHVEYAP--SVVGYESYALPAAVSHQSSTVVHEKRPYWR 63
            |||.:    ||.|:|:....:.|....||.:.|  :.||...::.|:||||||.|.||.|... :
  Fly     1 MFKFI----GVIALLVATASAGLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVHSKAVV-Q 60

  Fly    64 PIVDHTPILK-AAYA-PATSISYAPLGYA---GNSAGWYEPGIWGVSSYPSIY 111
            |:|  .||:| ..|: ||.::..||:.::   .::|    |.:..|.|.|.::
  Fly    61 PVV--APIVKTTTYSHPAVAVHAAPVVHSVPVVHAA----PVVHSVHSAPVVH 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4982NP_648866.1 None
CG13060NP_648873.1 Retinin_C 25..>73 CDD:282395 20/50 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.