DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4982 and CG13041

DIOPT Version :9

Sequence 1:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_648872.1 Gene:CG13041 / 39801 FlyBaseID:FBgn0036605 Length:124 Species:Drosophila melanogaster


Alignment Length:91 Identity:34/91 - (37%)
Similarity:49/91 - (53%) Gaps:11/91 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKVVFLLCGVFAVLIQARPSYLPSYEHVEYAP--SVVGYESYALPAAVSHQSSTVVHEKRPYWR 63
            |||.|    .|.|:|:....:.|....||.:.|  :.||...::.|:||||||.|.||.|... :
  Fly     1 MFKFV----AVIALLVATASAGLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSITQVHSKAVV-Q 60

  Fly    64 PIVDHTPILK-AAYA-PATSISYAPL 87
            |:|  .||:| ..|: ||.::..||:
  Fly    61 PVV--APIVKTTTYSHPAVAVHAAPV 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4982NP_648866.1 None
CG13041NP_648872.1 Retinin_C 25..>73 CDD:282395 20/50 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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