DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4982 and CG13043

DIOPT Version :10

Sequence 1:NP_648866.1 Gene:CG4982 / 39794 FlyBaseID:FBgn0036598 Length:113 Species:Drosophila melanogaster
Sequence 2:NP_648868.2 Gene:CG13043 / 39796 FlyBaseID:FBgn0036600 Length:148 Species:Drosophila melanogaster


Alignment Length:102 Identity:37/102 - (36%)
Similarity:49/102 - (48%) Gaps:19/102 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKVVFLLCGVFAVLIQARPSYLPSYEHVEY-APSV-----------VGYESYALPAAVSHQSST 53
            |||:| :|..:.|| ..|||.:|.....:.| ||:.           ||....::|.||||||.:
  Fly     1 MFKLV-VLSALLAV-AAARPGHLLESSPLVYAAPAATTIVQEPVLAKVGAVVKSVPTAVSHQSQS 63

  Fly    54 VVHEK----RPYWRPIVDHTPILK-AAYAPATSISYA 85
            |||..    .....|:|..||::. ||.||....|||
  Fly    64 VVHSHAHVVEDVVAPVVKSTPVVSYAAAAPVVHTSYA 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4982NP_648866.1 Retinin_C 36..82 CDD:427994 20/50 (40%)
CG13043NP_648868.2 Retinin_C 37..105 CDD:427994 23/64 (36%)

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